Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1107 ATGAAAAGGAATATAGCAGATAATTTCCATTCCAACCAAAGTGGATGGGTTCTAATCCAGCTAGTATTGTATACAGCGGAAATTTATGACCACTTGGACATGCCTTACGGCAGCAACTATCCCAAGTGCAATGGAGGTCACTGTCCTGGCCTTCTTGATCACCCATTGACCCCCGTCCAGAACATGTTTGTTGCAATTGATGGCCATAGTAATCTGGAGCAGGGGTTTTCACCTTATCATGGTAAAGTTGTTGCGATTGATGGCCATAGTAATCTGGAGCAGGGGTTTTCATCTTATCATGGTAAAGTATGGTTTCGGAAGGTTGATTCTGGTTGGGATAATCAGCTTCCAAGTGGATGCCTATTAATGTGGAATAGGAGGTTTTACCAGCGAGACGGTCAGGAATGCCTTTTGGTTGCTGCTAAGGTCTCTCACAAAGCAAAAGCAGAGTTCTTCGCAAAAATAACAACCCCAATGAGCCACCTTCGAATCGATGAAACGGTTGATTTCCCAACTGCTTCGCCTGAAATCCTTAGAATCGCCTTGCAATTGAGCAACTCATGGCTCAAAGCTCTGCCATTTCCGGTGGGAGTAACTATCTCATCCTGGCCAACTAACTCTATTCTTGTCGATGGAGAACTCGGGTCTGATTCCCCCGCCACCGCGGGGATCGAAGCAAACATCTGTGTCGTAGATCAGTGGTTCAGGCATTCAGGGGCTAGTCTTGAAATTGGCAGAACGGGAGATATCCGAAGCACCACTCCGAATTCTCAGGAAAGCCCGAGATTGAATGACACGCGCCACATCATGGCGCGAGCACTGCTGAAAATCATCAGGCTGAAAGCTGTTATCATCATGGACTTTGATCTAAGGTTACCTTCTGGTGACCAAGATAAGGATGAAGAACGAAATACAATTGCTGACATATTGGAAGTTGAAGAAAAAGTGCATACTGAAGATCTAGAAGGCCAGAATATGGTTGGTGCTAGTGTTGATGTACATGGTCTTGATAGTGGAGATTTGAATTCATCTACAGTGGATATGGCAATATTTAAGGAAGATACAAATCTTGAGCCCCTTTCTGGTTTGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTAGGTCAATGGGATTCAACACTGCAATACAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAATTTGCTTGTTCCAGGTATGGAACAAAAAGAGAGCATGACAAATCATTCAATAGACCACGTGCCCGGCAGAACAAGCAAGATGCTGAAAATTCAACTGGTCGAAGATCATGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCTGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTGTCAGTGAGCAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAGTCCATTTGACAAAGGCCGGAATTTGGGCTTGGAGTCAGGGGATGCCAAGCTTCAACTTGATTTTTTGGTGCAGATGCATAGTATGAATTCAAACTTCTTTTATGCAGTAGATATTGATGAGGATCAACGTCTGAAAAATCTTCTATGGGTTGACGCTAAAAGTAGGCATGACTATATGAACTTTTGTGATGTAGTTTCTTTTGACACCTTCTATGTTAGAAACAAATATAAGTTGCCTCTTGCGGCTTTTGTTGGAGTAAATCAGCACTATCAATTTATAATGCTTGGGTGTGCTTTAATATCAGATGAAAGTGCTGCTACTTATTCTTGGATAATGCGGACGTGGCTGAAAGCAATTGGTGGCCAAGCTCCAAAAGTGATCATCATTGACCATGACAAGACATTAAAGTCAGTTATTTTAGATGTCTTTCCTAATGCTCATCACTCCGTGTGCTTATGGCAAGTATTAGGGAAGGTGTCTGAAAATATGGCTCATGTAATTAAGAGACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACAAATGATGAGTTTGAGAAGAGGTGGTCAAAAATTGTTGATAGGTTCGAACTTCGAGAGGATGAATGCATGCTGTCATTGTATGAAGATCGCAAGTTTTGGGTGCCAACATTCATGAGGGATATTTTCTTAGGTGGTTTGTCCACTGTCCAGCGATCAGAAAGTGTGAATTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTGGTCAAGCAGTACGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGGTGATTCTGAGACATGGAATAAAGTGGCAACATTAAAAACTCCTTCACCATTGGAGAAGAGTGTTGCAGGGAGTTACACGCATGCAGTGTTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATGCAGGCATTAATTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCATTGTTGTGTGGAATGAAATTAAGTCCGAAGTTTCATGCATATGTCGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCTTTGATTGTTCTTCAATATTCTGGCCTTTCGGTAATCCCATCCCAATATATCTTGAAACGGTGGACAAGAGATGCAAAAGGGGGACAAACAATGGGAGAAGAATCTGAACATAGGCTAGCTAGGGTACAACGATACAATGATTTATGTCAGCAAGCAATGAAGTTGAGTGAAGAGGGATCTCTATCTCAAGACAGTTATAGTATTGCATTCCACGCGTTACGTGAAGCATACAAAAGTTGTTTGAGCGCTAACAATTCTAGCAAGAGTTCTACCGAAGTTGTCATATCAGCGAGTCACAGTCAGCTCTCCAATGAAGAAGATACCCAAAGTAGAAATATGGGAAAGACAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGCTGAACTCCGAGTCCGAAATCATGACTGTTGGGGCACAAGATAACATGCAGCAAATGGACAAATTCAACGCAAGGGCAGTAACCCTTGATGGTTATTATGGCTCTCAACAGAGTGTTCATCAGGGAATGTTGAACTTGATGGGGCCAACACGTGATAATTATTATGGGAATCAACAGACAATTCAGGGGCTGGGACAATTAAGTTCCATACCGACAAGCCACGATGGTTACTATGGTGCTCATCAAAGCATGCCTGGTCTGGCACAGCTTGATTTTTTCCGGGCCTCGACGAATTTCACTTATGGCATTCGGGATGATCCAAATGTAAGACCAACACAATTGCATGAGGACCCATCAAGACATGCATGA 3390 0.4147 MKRNIADNFHSNQSGWVLIQLVLYTAEIYDHLDMPYGSNYPKCNGGHCPGLLDHPLTPVQNMFVAIDGHSNLEQGFSPYHGKVVAIDGHSNLEQGFSSYHGKVWFRKVDSGWDNQLPSGCLLMWNRRFYQRDGQECLLVAAKVSHKAKAEFFAKITTPMSHLRIDETVDFPTASPEILRIALQLSNSWLKALPFPVGVTISSWPTNSILVDGELGSDSPATAGIEANICVVDQWFRHSGASLEIGRTGDIRSTTPNSQESPRLNDTRHIMARALLKIIRLKAVIIMDFDLRLPSGDQDKDEERNTIADILEVEEKVHTEDLEGQNMVGASVDVHGLDSGDLNSSTVDMAIFKEDTNLEPLSGLEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLESGDAKLQLDFLVQMHSMNSNFFYAVDIDEDQRLKNLLWVDAKSRHDYMNFCDVVSFDTFYVRNKYKLPLAAFVGVNQHYQFIMLGCALISDESAATYSWIMRTWLKAIGGQAPKVIIIDHDKTLKSVILDVFPNAHHSVCLWQVLGKVSENMAHVIKRHENFMAKFEKCIYRSWTNDEFEKRWSKIVDRFELREDECMLSLYEDRKFWVPTFMRDIFLGGLSTVQRSESVNSFFDKYVHKKTSVQDLVKQYEAILQDRYEEEAKGDSETWNKVATLKTPSPLEKSVAGSYTHAVFKKIQVEVIGAVACHPKAERQDDAGINYKVHDMEKNQDFIVVWNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPSQYILKRWTRDAKGGQTMGEESEHRLARVQRYNDLCQQAMKLSEEGSLSQDSYSIAFHALREAYKSCLSANNSSKSSTEVVISASHSQLSNEEDTQSRNMGKTNKKKNPTKKKKLNSESEIMTVGAQDNMQQMDKFNARAVTLDGYYGSQQSVHQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPTSHDGYYGAHQSMPGLAQLDFFRASTNFTYGIRDDPNVRPTQLHEDPSRHA 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1107 1129 MobiDBLite consensus disorder prediction 972 990 - -
Lele12g1107 1129 MobiDBLite consensus disorder prediction 414 445 - -
Lele12g1107 1129 Pfam FAR1 DNA-binding domain 373 475 IPR004330 -
Lele12g1107 1129 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 353 960 IPR031052 GO:0006355
Lele12g1107 1129 Pfam MULE transposase domain 572 663 IPR018289 -
Lele12g1107 1129 Pfam SWIM zinc finger 857 886 IPR007527 GO:0008270
Lele12g1107 1129 MobiDBLite consensus disorder prediction 1109 1129 - -
Lele12g1107 1129 SMART 26again6 863 890 IPR006564 GO:0008270
Lele12g1107 1129 ProSiteProfiles Zinc finger SWIM-type profile. 841 888 IPR007527 GO:0008270
Lele12g1107 1129 MobiDBLite consensus disorder prediction 972 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1107 Lele-ChrLele12 18349273 18358052 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele12g1107 FAR1 1.7e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0150 10 990989 994298 Lele12g1107 12 18349273 18358052 hybridization