Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1098 ATGATGACGTCCTTTCCGTCCAAAAACCTATGGATTCAACGGCAACAATGCCCATGTGGAGATTGGAAATGTTATGTGACACATGAGGGCGATGGTGAAGAGATTTCAGCTGGACCGGAATTAGTGAAGACACACGAAGCATCGTCAGAAGCTATGGTTTCACCCTATGTAGGAATGGTGTTTAAGAGTGATGATGGTGCATTTGAATATTATGGGAATTTTGCCCGGAAGAATGGGTTCTCAATTAGAAAAGAAAGATCCAGACTTAGTCCGCAATTAGGCGTTTATAAACGTGACTTTGTTTGTTACCGTTCTGGGTTTGCCCCGATGAAGAAAAAGTCTAATGGAGAACCCCATAGAGATAGAAAATCCGTACGTTGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTAGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTACGGCTTCTTCCAGCGTATCGTAAAATACAAGAGGCTGATCAAGAGCGCATACTCTTACTTTCTAAAGCCGGGTTTCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCATTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAGCAGGAAGAAAGTTATTCAGGAAAATGATGCATTGCTAAGTGAGAAAAGAGAAAATGACGTATTGGAACTTCTTGAGTCATGCAAAACCATGAAAGAGACAGATGATGATTTTGTTTATGATTTTTCAGTGCATGGGAATGAAATGGTTGAGAATATAGCCTGGGCTTATGGTGACTCTGTTCGCGCATATTCTATGTTTGGTGACGTGGTTTATTTCGACACTACATATCGATCAATCACATACGGATTGGTCTTTGGTGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTATGGTTGTGTTCTATTGCAGGATGAAACGCTTCAGTCCTTCTCTTGGGCACTACAGAGTTTTGTCCGACTCATGAGAGGAAGATGTCCGCAAACAATTTTAACCAATATTGATCCTAGCCTTAGAGATGCCATAAGAAGCGAATTGCCAGGCACTAAACATGTAATCTCTAGATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTATTCCTCTTGGGTCTCGCTACGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATCCAGAAGAATTTGAACTTCGATGGAACCAAATGACATCTGCCTTTGGTCTTGGATCAGATAGGCATATAGAACTACTATACACATTGCAGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTCTGGCTCGGATGGCAACAGCAGCTTACTCGAAGTCATTAGACAGTTTTTTGAAAGGCATCTTTAGTGCGCAAACATGCTTACGGAGCTTTTTTGAGCAGGTTGGTATTTCTGCAAATGTTCTTTACCATGCTCGTCAAGAAACTCCACATATTCACCTCAAAAGTTGCATACCTATCGAAGAACACGCCCGGAGTATATATACACCTTTTGCTTTTAATGCCTTACAACAAGAATTATTGCTAACAATGCAATATGCTGCATCTGAAATGTCCAATGGATCATATATTGTACGCCCCTTCAAAAGGATGGACGGCGAGCGTCTTGTGATATGGCTAGTTGAAGATGAACAAATCCATTGCTCTTGCAAGGAATTTGAATCCTCAGGTATATTGTGCAGACATGCCCTTCGTGTATTCATAATGAAGGATTACTTTCAGCTCCCTGATAAGTACTATTTAAGTAGATGGCGACAACACGAGTCCTCTTTACTTCTTGATAATGATCATAAGAGTAATCATCAAAGTATTGAGGATGAATGGTTTCAAGAATATCAGTCCCTTGCTGAAACTTTGTTTGCAGAATCTTCAATTACAAAGGAGCGATCCGACTTTGTTCGTAGAGAACTTACAAAAGAAATTACTAGGATTCTTAGTGAGGTTAGAAATCTGCCTGAAAATGATGGGGTCACAATGGACTTGACTATTTAA 2076 0.4003 MMTSFPSKNLWIQRQQCPCGDWKCYVTHEGDGEEISAGPELVKTHEASSEAMVSPYVGMVFKSDDGAFEYYGNFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPMKKKSNGEPHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQSRKKVIQENDALLSEKRENDVLELLESCKTMKETDDDFVYDFSVHGNEMVENIAWAYGDSVRAYSMFGDVVYFDTTYRSITYGLVFGAWFGIDNYGRTIFYGCVLLQDETLQSFSWALQSFVRLMRGRCPQTILTNIDPSLRDAIRSELPGTKHVISRWCIMPKVPCWFSIPLGSRYEEFKSEFDALYHIENPEEFELRWNQMTSAFGLGSDRHIELLYTLQASWALSYVRGFFLARMATAAYSKSLDSFLKGIFSAQTCLRSFFEQVGISANVLYHARQETPHIHLKSCIPIEEHARSIYTPFAFNALQQELLLTMQYAASEMSNGSYIVRPFKRMDGERLVIWLVEDEQIHCSCKEFESSGILCRHALRVFIMKDYFQLPDKYYLSRWRQHESSLLLDNDHKSNHQSIEDEWFQEYQSLAETLFAESSITKERSDFVRRELTKEITRILSEVRNLPENDGVTMDLTI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1098 691 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Lele12g1098 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 644 IPR031052 GO:0006355
Lele12g1098 691 SMART 26again6 574 601 IPR006564 GO:0008270
Lele12g1098 691 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Lele12g1098 691 Pfam MULE transposase domain 292 384 IPR018289 -
Lele12g1098 691 Pfam SWIM zinc finger 569 598 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1098 Lele-ChrLele12 18300315 18302563 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele12g1098 MULE 1.5e-14 CL0219