Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1090 ATGAGTCGAATGATACATGACATTGAAGATGGGGAGCTCCCCAGTGATCAGAATGGGCCACAGTTGAATGATGAGGGTAATGGAGGAAGTGCAAGTGGAGGTAATCTGAAGAAAGGTCCATGGACATCTGCTGAAGATGCTATTTTGGTGGATTATGTTAAGAAGCATGGGGAAGGGAACTGGAATGCTGTTCAGAAGCACTCAGGTCTGTCCCGATGCGGCAAAAGCTGCCGACTGCGGTGGGCAAATCACCTAAGGCCAAATTTAAAGAAAGGAGCTTTTACTGCAGAAGAAGAGCGGTTGATTGCTGAACTCCATGCCAAGATGGGAAACAAATGGGCACGCATGGCTGCACATCTGCCTGGTCGTACTGATAATGAGATAAAGAACTACTGGAATACTCGTATAAAGAGGCGTCAGCGGGCTGGCTTGCCTCTATATCCTCCTGAAGTGTGTTTACAAGAATCAAAAGAGAGTCAACAAGGCCAAAGCACTGCTGGAAAAATTGGAGATAGAGGAAATAATGATTTTCTTCAGGAAAACAGTTATCAGAAACATGATACTCTATTTGATAGGCTGAATGCAAATCAGGGAGGCTTGCCTTATGTGCCAGAGATTCCTGACATTTGTGCTAATAACATTTTGCTGAAAGGTCTTGGTTCTTCCCAGCATTGTAATTTTTTGCCTTCAATATTACCTTACCATAAGCGCTTTCATGATTCAACAATGCCATTTCTTAGTTCATCTGATGTGACCAGAAATGGGTTTTATCCTTTACACCATATTCAGGATTATACTTATGATAAGATTGCACAATCATTTGGATACCATTCTCCCCTTGATCCTGGTCCCTCCTCACAGAAATCACTGTCTTACAGCCATTCACTTTCAAATGGCGATTCCTCCTCTACTTCTAAGCCAACTTTTGAGGCTTTGAAGCTGGAGCTCCCTTCACTCCAATATCCAGAAACTGATTTAGGCAGCAGGGGTACATCTCCTCCGCCTCCTTTGCTAGAATCAGTTGATATTCTCGCAGGTACTACTCTGCCAACTAGTTTACTGGAGTCAGATTCTTCTTCACCATATAACAGTGGCCTCCTAGATGCTTTACTTCATCAGTCCAAGAATCTGAGCAGTTCAAAGAACCATTGTTCTGATAAGAGTTCAAATTCATCTACTGCTACCCCTGGTATTAGAGCCGACAGTTCCACTTTGTATGTGTATGAGACAGAATGTGAAGACTATGCAGATTGTGTTTCTCCATTTGGTGCAACTTCAATATTGAATGAATGTCTTGCTGTTAATGTCAACGGAAATTCATTTGATGAACTGCAACCTGCACAGACCTTAAATGCTGGTCTTACTACAAATTCAGTTACTGGTTTTTATAGAGATACATGCTATATTTGTGAGGCTGAACTCAAATTTTCTGCAGAGAACACTCTGAAATCGGAATCTGCTTACAACGCTTTGACCCCCAACAGTGAAGATCAAGACATGTCAATGTTGGATATGCCCCGACCCGATGTTTTGCTTGCTTCAGAATGGTATGAGCAAGGCCCTGCATTTACCAAGAACCAGGCTGACATGAACAATCCCATAGCAACCCTCATCAGTGGTGCTGATTCAGCCACCGACTACAATTACATATCTGCGGAAATCTCATCACCTAGTCAATTATGGGGTTTGGATTCTTGCACTTGGAATTACATGCCTGCTGTTTGCCAAATGTCTGATCTTCCATAA 1746 0.4267 MSRMIHDIEDGELPSDQNGPQLNDEGNGGSASGGNLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQESKESQQGQSTAGKIGDRGNNDFLQENSYQKHDTLFDRLNANQGGLPYVPEIPDICANNILLKGLGSSQHCNFLPSILPYHKRFHDSTMPFLSSSDVTRNGFYPLHHIQDYTYDKIAQSFGYHSPLDPGPSSQKSLSYSHSLSNGDSSSTSKPTFEALKLELPSLQYPETDLGSRGTSPPPPLLESVDILAGTTLPTSLLESDSSSPYNSGLLDALLHQSKNLSSSKNHCSDKSSNSSTATPGIRADSSTLYVYETECEDYADCVSPFGATSILNECLAVNVNGNSFDELQPAQTLNAGLTTNSVTGFYRDTCYICEAELKFSAENTLKSESAYNALTPNSEDQDMSMLDMPRPDVLLASEWYEQGPAFTKNQADMNNPIATLISGADSATDYNYISAEISSPSQLWGLDSCTWNYMPAVCQMSDLP 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1090 581 MobiDBLite consensus disorder prediction 1 40 - -
Lele12g1090 581 CDD SANT 93 134 IPR001005 -
Lele12g1090 581 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Lele12g1090 581 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 85 IPR017930 -
Lele12g1090 581 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 537 - -
Lele12g1090 581 MobiDBLite consensus disorder prediction 16 30 - -
Lele12g1090 581 MobiDBLite consensus disorder prediction 320 340 - -
Lele12g1090 581 Gene3D - 37 90 - -
Lele12g1090 581 MobiDBLite consensus disorder prediction 281 306 - -
Lele12g1090 581 FunFam MYB-related transcription factor 37 90 - -
Lele12g1090 581 Gene3D - 93 139 - -
Lele12g1090 581 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
Lele12g1090 581 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Lele12g1090 581 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Lele12g1090 581 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lele12g1090 581 MobiDBLite consensus disorder prediction 154 178 - -
Lele12g1090 581 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lele12g1090 581 CDD SANT 40 85 IPR001005 -
Lele12g1090 581 FunFam Transcription factor GAMYB 93 139 - -
Lele12g1090 581 SMART sant 37 87 IPR001005 -
Lele12g1090 581 SMART sant 90 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1090 Lele-ChrLele12 18234540 18238418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1090 7 577 MYB Transcription Factor Family AT3G11440 40.203 5.99e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele12g1090 Myb_DNA-binding 5.5e-15 CL0123