Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1089 ATGGCTTCTTTGAAAGTCCCTCATTATTTTTCTTTTGACCTTGTTGTCATCGAAAAGAACAAGGAATCAAAGGATGTGGGGAGACAAGAGAGGAGTTCAAGAACAATATTTGTGGAGGGTGCAAGAACAGGAGGAAGTAAGAGGGAATTCACATATGCAGAGCTAAATGATAATGGAAGCAACATGCAAGCAGGGGACAAGGAGTTCAACTCCGAGGTTGATGCACTCAGCAGAGTTAGACATGAGAATGTTGTTGTCATGTTGGGATCTTGCTCTGAAGGGAATCATAGGCTCCTCGTCTATGACTTTGTCTGCAAAGGTTCTCTCAACCAGCATTTACACCGTAAGACTCAACAAAATCTTAACCTTTTTGGTCATGCAGTAGGTAATTTTGGTGGTTATTACTGAATTTGGGGCTGGAATAATGCGGAACACTGTAGGAGACCTCTGAGTTGGGAGAACAGAATCAAAGTAGCAATTGGAGCAGCGAGAGGATTACTAAATCTGCATGACAACAACATTATTCACAGAGACATGACACCTAACAACATTCTTCTTATTCACGACTTTGAAACCTTGCTGGGAGATTTTGGGTTGGCAATTACAAGTGAAGAGAAAGAGACATCATCAGAAGAATGTGTAGGAGGATATGAGGATTACGTGGCACCAGAATATGCTGAAGATGGAAAATTATCCACAAAAACAGATGTTTACTCTTTTGGGGCAAGTCAACTGTTGAGAGAGAAGAAATGTGAGAGTGTGATAGATAAGAGGATAATGGAAGATCATAATTGTCATCAGTTGTATGGGATGAGTCTTCTTGCTCAGTCTTATCTCTTTAAAGATCCTCACAAGCGTTTAACTATGACCAAGAAGGATGCGGATGCAATGATAAGGTGA 900 0.4078 MASLKVPHYFSFDLVVIEKNKESKDVGRQERSSRTIFVEGARTGGSKREFTYAELNDNGSNMQAGDKEFNSEVDALSRVRHENVVVMLGSCSEGNHRLLVYDFVCKGSLNQHLHRKTQQNLNLFGHAVGNFGGYYXIWGWNNAEHCRRPLSWENRIKVAIGAARGLLNLHDNNIIHRDMTPNNILLIHDFETLLGDFGLAITSEEKETSSEECVGGYEDYVAPEYAEDGKLSTKTDVYSFGASQLLREKKCESVIDKRIMEDHNCHQLYGMSLLAQSYLFKDPHKRLTMTKKDADAMIR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1089 299 Pfam Protein tyrosine and serine/threonine kinase 62 242 IPR001245 GO:0004672|GO:0006468
Lele12g1089 299 Gene3D Transferase(Phosphotransferase) domain 1 139 296 - -
Lele12g1089 299 Gene3D Phosphorylase Kinase; domain 1 47 104 - -
Lele12g1089 299 ProSitePatterns Tyrosine protein kinases specific active-site signature. 174 186 IPR008266 GO:0004672|GO:0006468
Lele12g1089 299 PANTHER OS01G0253100 PROTEIN 63 242 IPR045271 -
Lele12g1089 299 SUPERFAMILY Protein kinase-like (PK-like) 64 290 IPR011009 -
Lele12g1089 299 ProSiteProfiles Protein kinase domain profile. 1 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1089 Lele-ChrLele12 18231610 18233637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1089 48 241 Trihelix Transcription Factor Family AT5G38560 40.704 1.79e-35 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g1089 PK_Tyr_Ser-Thr 1.1e-30 CL0016