Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1057 ATGGAAATGCATGACACTGATCTGGGGACTTCGGAGTCTTGGCGCCTAGCTCACGCTGCTTACCCACCGAGGTCAAGGAGGGAGGATATGAAAGTTCCTTGTTGTTCGGTTTGCCAAACGCGGTACAACGAGGAGGAGAGAGTTCCTCTTCTGCTCCAATGCGGGCATGGATTTTGCAGAGAATGTTTATCGAGAATGTTCTCGGCGTCCGTGGATACCACGTTGCCTTGTCCCAAGTGTCGCCATGTGTCTAATATCGGCAACTCCGTTCAATCTCTTCGCAAGAACTACACTGTTCTTGCGCTTATACACTCGGCTTCGAATGCATCCCGGTTGAAGTTTGACGGTGACTTCACGGGCGATGAAGAAGACGGGGACAATGACGATGAGTCTGTCATATTTGGCCGTCGTGGATCCCAGACGTCGAGCTCAGGCAGGTGTGGATCTGTGATCGAGGTTGGGGTGCACCGGGAATTAAAATTCCTACGGCGGATTGGGGAGGGGAGGAGGGCCGGAATGGAAACGTGGACGGCGGTGCTCAGTGGAAGCGGCAGAAGTGGACAGTGCAGGCACTATGTAGCGGTGAAGAAGGTAGGAATAACAGAGGAGATGAATTTGAATTGGGTACGTGGACAGCTTGAGAATTTGCGTCGTGCATCGATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGATGGACCAGAATTTGTGTCTTGTAATGGACTGGTGTTATGGATCGGTTAAGTCTGAGATGCAGCGCAATGAGGGCAGACTCACTTTGGAGCAAGTCCTAAGGTATGGGGCGGACATTGCACGAGGGCTGGCTGAGCTTCATGCTGCAGGTGTTGTTTGCATGAATCTAAAGCCATCCAATCTTCTTCTTGATGCATATGATCATGCAGTGGTTTCTGATTATGGACTTGCCGGAATTCTGAAAAAGCCTTCCTGTTGGAAGGCGCAACCAGAGCGTGACTCCTCGAGGATCCATTCATGTATGGAATGTATAATCCTCAGCCCACATTACACAGCCCCAGAGGTTTGGGAGCCTGTTAAAAAGTCAAATTTATTCAGGACTGATTCAATAGGTGTATCCACAGAGTCAGATGCTTGGAGTTTTGGTTGTACTTTGGTGGAAATGTGCACGGGCTTTGTTCCCTGGGCTGGTCTAAGTGCGGAGGAAATTTATCAAGCCGTTGTCAAGGCACGGAAATTGCCTCCACAGTATGCTTGTATTGTTGGAGGCGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGTGCAATGTTAGCTACATTTCTCCGTCATTTGCAGGAACTACCATGCAGTCCTGCTGCAAGCCCTGATAAAGATTCTGTTGAATGTTCTGTATCAAATGTGCTAGAAGCTTCCTCTCCAGCACTTGAATTGAAACTCCCTCAAGATTATGTGAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTTCTTGCAAAGGCTGTCTCAGTAAATGGTAGCAACTGTATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAAACTGCTCTCCACTTGGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGCTGATGTCTTGGACAAAGATGGAGTTCCTCCACTTGCTTTTGCCTTAGCAGCTGGATCTCCGGAATGTGTTCGTAGTCTTATCAAAAGAAATGCTAATGTGAGGTCTCAATTAGGAGATGGCCTTGGCCCATCTATTGTTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTATTATTGGCTGGAGCTCATCCAAATGCAGTTGACGACCAAGGTGAATCTATATTGCATTCTGCAGTTGCCAAGAACTATACAGATTGTGCTCTAGTGATACTAGAAAATGGGGGCTGCAGATCAATGGGGATCTTAAATTCAAAGAATCTGACACCATTGCACTTGTGTGTGAAATCATGGAATGTTGCTATTGTGAAAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCTTTGGCACTGCATTGTGCATGGCAGCTGCCTCTAAGAAAGATCATGCAATTGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGCGTACAGCTTTGCATACAGCTGTCATATCTAATGATGTTGAGTTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACACCTCTTCACTTCGCTTTAGCAAGTGGAGCAAAGTCATGTGTTAAATTGCTTCTATCTGCTGGGGCAAATTATAATTTGCAGGATGATGATGGCGACAATGCTTTGCACAAAGCTGCAAAGGCAGCAAAATTGGCACGTGAAAACCTTGACTGGCTAATGGTGATGCTAAGAAATCCTGATGCTGATGTTCATGTCAGAAACCACAGGCAAGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAGGCACTCATGGATAGAGGAGTTCATCTAACTCCTACAATGTTTGAAGTGGGAGATTGGGTGAAATTCAAAAGAACTGTCACAACTCCAACCTATGGGTGGCAAGGTGCTAGCTCAAAGAGCGTTGGCTTTGTGCAAAATGTTCCAAGCAGAGACACTCTCATTGTTTCGTTTTGTTCTGGAGATGCTCATGTTTTAGCAACTGAAGTTGTGAAAGTCATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAGGTTAAAGAGCCCAGGTTTGGTTGGCGTGAACAGTCACGTGACAGCATAGGCACAGTATTATGCATTGATGATGATGGAATCCTACGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACGTCTACAAAGCATGGGTTAGGATCTGTAACACCAGGAAGCATTGGTATTGTATCTTCTATTAAACCAGACAGTAGCCTGCTGATAGAACTTAGCTATCTTACAACTCCATGGCATTGTGAACCAGAAGAAGTTGAGCATGTTGCTCCTTTCAGGATTGGAGATCGGGTATGTGTGAAGCGATCTGTTGCAGAACCTAGATGTGCTTGGGGAGGTGAAACTCATCAAAGTGTTGGAAGAATTAGTGAGATAGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCATGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTGTCTTCCCCAAAATATGGATGGGAGGATGTCACTAGGAACAGTATTGGGGTAATTCATAGCTTGGAGGAAGATGGCGACATGGGTATTGCTTTCTGCTTCCGAAGTAAACCTTTTTCTTGCTCTGTCACTGATGTGGAGAAAGTGGCCCCCTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTACTGAGCCTCGACTTGGATGGTCAAATGAATCACCAGCTACAGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTTTCAATGTGAGAGTCGCAGGCAGGCGGAGCTTGTGGAAAGTTTCTCCTGGAGATTTAGAACAACTTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCGTAGGAACTAGACAATGTTTTGATTGGAATGGTGCTGCGAAGGATGGTATTGCAGTTGTACACAGTATACAGGATTCTGGATACTTGGAATTGGCTAGCTGTTTTCGTAAACAGAGGTACTTCGCTCATTATACAGAAGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGCATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTGAATCTCGAGGCCTTGTAACTAGCATTCATGCCGATGGAGAAGTAAGGGTAGTATTCTTTGGTTTGCCGGGTTTGTGGAGAGGAGATCCTGCAGACCTCGAGATTGAGCAGATGTTTGAAGTGGGGGAGTGGGTAAGGTTGAAAAATAATGCAAATAATTGGAAATCCATCATGCCGGGCAGCGTCGGCATCGTACAAGGAATAGGATTTAATGGCGACGAATGGGACGGAAGCACTTGTGTTGGCTTTTGTGGGGAGCAAGAAAGTTGGGTTGGACCAACTTCCCATCTTGAAAGAGTTGACAAACTCTCTGTTGGGCAGAAGGTTAGAGTTAAGGAAACTGTGAAGAATCCAAGATTTGGTTGGGCAGGCCACAGCCATGCTGGTGTCGGAACCATATCAGCTATCGATGCTGATGGAAAGCTTAGAATATACACTCCACCAGGATCAAAGGCATGGATGTTGGACCCATCAGAAGTAGAATTAGTTGAGGAGGCTGAGATACAAATTGGGGACTGGGTGAAGGTTAGAGCATTGGTTTCAACACCAACCCACCAGTGGGGAGAAGTGGGTCAATCGAGCATCGGGGTGGTTCATCGGATGGAAGGCGAGGATCTGTGGGTGTCATTCTGTTTCATGGAGAGACTATGGCTTTGTAAGGCATGGGAAATGGAAAAGGTTAGGCCATTAAAAAATGGGGACAAGGTAAGGATCAGAGATGGAATTGTGAGTCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGATGCCAATGGAAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAGCCCTGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA 4881 0.4624 MEMHDTDLGTSESWRLAHAAYPPRSRREDMKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASVDTTLPCPKCRHVSNIGNSVQSLRKNYTVLALIHSASNASRLKFDGDFTGDEEDGDNDDESVIFGRRGSQTSSSGRCGSVIEVGVHRELKFLRRIGEGRRAGMETWTAVLSGSGRSGQCRHYVAVKKVGITEEMNLNWVRGQLENLRRASMWCRNVCTFHGVMEMDQNLCLVMDWCYGSVKSEMQRNEGRLTLEQVLRYGADIARGLAELHAAGVVCMNLKPSNLLLDAYDHAVVSDYGLAGILKKPSCWKAQPERDSSRIHSCMECIILSPHYTAPEVWEPVKKSNLFRTDSIGVSTESDAWSFGCTLVEMCTGFVPWAGLSAEEIYQAVVKARKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLATFLRHLQELPCSPAASPDKDSVECSVSNVLEASSPALELKLPQDYVNHLHRLVSEGNVRGVRHLLAKAVSVNGSNCISSLLEAQNADGQTALHLACRRGSAELVEAILACKEADADVLDKDGVPPLAFALAAGSPECVRSLIKRNANVRSQLGDGLGPSIVHICAYHGQPECMRELLLAGAHPNAVDDQGESILHSAVAKNYTDCALVILENGGCRSMGILNSKNLTPLHLCVKSWNVAIVKRWVEVATSDEIAEAIDIPNPFGTALCMAAASKKDHAIGADPSAQDSQYGRTALHTAVISNDVELVKVILAAGVDVNIRNEQNSTPLHFALASGAKSCVKLLLSAGANYNLQDDDGDNALHKAAKAAKLARENLDWLMVMLRNPDADVHVRNHRQALPREWISEDLMEALMDRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQGASSKSVGFVQNVPSRDTLIVSFCSGDAHVLATEVVKVIPLDRGQHVQLKSEVKEPRFGWREQSRDSIGTVLCIDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSTKHGLGSVTPGSIGIVSSIKPDSSLLIELSYLTTPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRCAWGGETHQSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVGDWVKIKSSVSSPKYGWEDVTRNSIGVIHSLEEDGDMGIAFCFRSKPFSCSVTDVEKVAPLEAGQEIHVMPSVTEPRLGWSNESPATVGKIVTIDMDGAFNVRVAGRRSLWKVSPGDLEQLSGFEVGDWVRSKPSVGTRQCFDWNGAAKDGIAVVHSIQDSGYLELASCFRKQRYFAHYTEVEKVPCFKVGQHVRFRTGLVEPRWGWRGAQAESRGLVTSIHADGEVRVVFFGLPGLWRGDPADLEIEQMFEVGEWVRLKNNANNWKSIMPGSVGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDKLSVGQKVRVKETVKNPRFGWAGHSHAGVGTISAIDADGKLRIYTPPGSKAWMLDPSEVELVEEAEIQIGDWVKVRALVSTPTHQWGEVGQSSIGVVHRMEGEDLWVSFCFMERLWLCKAWEMEKVRPLKNGDKVRIRDGIVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat profile. 533 566 IPR002110 GO:0005515
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat region circular profile. 769 801 - -
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Lele12g1057 1626 SMART ring_2 35 80 IPR001841 -
Lele12g1057 1626 PRINTS Ankyrin repeat signature 534 549 IPR002110 GO:0005515
Lele12g1057 1626 PRINTS Ankyrin repeat signature 785 799 IPR002110 GO:0005515
Lele12g1057 1626 Pfam Ankyrin repeats (many copies) 605 652 IPR002110 GO:0005515
Lele12g1057 1626 SUPERFAMILY Ankyrin repeat 525 813 IPR036770 -
Lele12g1057 1626 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 30 1625 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lele12g1057 1626 ProSiteProfiles Protein kinase domain profile. 159 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1057 1626 Pfam Protein kinase domain 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1057 1626 ProSitePatterns Zinc finger RING-type signature. 54 63 IPR017907 -
Lele12g1057 1626 MobiDBLite consensus disorder prediction 120 140 - -
Lele12g1057 1626 SMART ANK_2a 736 765 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 602 631 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 802 837 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 635 666 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 567 596 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 490 519 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 769 798 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 533 563 IPR002110 GO:0005515
Lele12g1057 1626 SMART ANK_2a 670 701 IPR002110 GO:0005515
Lele12g1057 1626 Pfam Ankyrin repeats (3 copies) 726 800 IPR002110 GO:0005515
Lele12g1057 1626 Pfam Ankyrin repeats (3 copies) 512 595 IPR002110 GO:0005515
Lele12g1057 1626 SUPERFAMILY Protein kinase-like (PK-like) 158 449 IPR011009 -
Lele12g1057 1626 ProSiteProfiles Zinc finger RING-type profile. 35 81 IPR001841 -
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat region circular profile. 533 554 - -
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Lele12g1057 1626 Gene3D Transferase(Phosphotransferase) domain 1 153 454 - -
Lele12g1057 1626 Gene3D - 602 773 IPR036770 -
Lele12g1057 1626 SUPERFAMILY RING/U-box 26 87 - -
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat region circular profile. 736 768 - -
Lele12g1057 1626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 114 IPR013083 -
Lele12g1057 1626 ProSiteProfiles Ankyrin repeat profile. 769 801 IPR002110 GO:0005515
Lele12g1057 1626 Pfam RING-type zinc-finger 35 78 IPR027370 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 1372 1493 IPR040847 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 993 1113 IPR040847 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 1502 1620 IPR040847 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 1245 1366 IPR040847 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 869 987 IPR040847 -
Lele12g1057 1626 Pfam Mind bomb SH3 repeat domain 1175 1239 IPR040847 -
Lele12g1057 1626 Gene3D - 477 601 IPR036770 -
Lele12g1057 1626 Gene3D - 774 862 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1057 Lele-ChrLele12 18044753 18053609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1057 167 445 MAP Kinase Kinase Kinase AT4G08500 26.573 5.11e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele12g1057 Pkinase 3.7e-30 CL0016