Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1052 ATGGAAGACAAACAACCCCAACAATCTTCCGTTCCTCATGACCCTCCTCCTCCTCCTCCTCCTCCGTCTCTCCCCAATCATCACGACCATACTGATCTCGTCAAAGAAGAATCCCCCAGAAAACCCGTCACCGCCGGCGGCGGCGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTTTGGAGGCGTACGAAGCTAAATGGGTGCTCCGTAACAGAGCTAAGCTCAAGGGCCATGATTGGGAGGACGTCGCCGGGTACGTGTCTTCACGCGCCAACTGTACCAAATCTGCTAAGACCCAAACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCCGAATCGGCGTCCGGGGATGCGTCGTCGTCTTGGCCTTTGTATTCGCGTCTTGATCTTCTCCTTCGTGGGACTGGGCCTACTCCGTCCACCACCACGCTGGCTGTGCCGCTTGCGGCTGCCGCATCGGCACCGTCTCAATTGCCACATCACCACGTCAATAACCAGGGTTTTGTGTTATTGGAGCCTCCTCATCAACCACAACAGCCTCCGGTAGCCGCCGTTGCTCCTTCTCCGCTTGCCAACGCTCAAAACTCTCAAGGATCCAACGGTATTGACAGATTAGCCAAGGAAGATGGATTAGGGACAAACAAGTCATCGGATCAAGTGTCCAACAAGAACATGAATGAAATTCTGGACACAGATAGCAGCACACCAGCCCTATATAGCCATTCAAAGGAGCACCCAACAAGAAGCAACAACAACACCAACAAGAAGAGGAAGACGAAGATGGATCATCGTAGCAACACGAAGAAGATGAAGCGGAGGAGCGGAGGAGAAGGGAAGATGAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGATGTGGTGGTGAGATCGGAGCAAGCGAGGATGGAGATGATGAAGGAGATAGAGAAGATGAGGGTGGAAGCAGAGGCCAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATCATTGCTAATACGCAGATAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGACTTAA 1116 0.509 MEDKQPQQSSVPHDPPPPPPPPSLPNHHDHTDLVKEESPRKPVTAGGGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAGYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPSTTTLAVPLAAAASAPSQLPHHHVNNQGFVLLEPPHQPQQPPVAAVAPSPLANAQNSQGSNGIDRLAKEDGLGTNKSSDQVSNKNMNEILDTDSSTPALYSHSKEHPTRSNNNTNKKRKTKMDHRSNTKKMKRRSGGEGKMNEMGIAESIRWLADVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQIEIARIFASVNNKGVDSSLRIGRT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1052 371 Coils Coil 314 334 - -
Lele12g1052 371 MobiDBLite consensus disorder prediction 223 258 - -
Lele12g1052 371 MobiDBLite consensus disorder prediction 201 290 - -
Lele12g1052 371 FunFam Trihelix transcription factor ASIL2 57 122 - -
Lele12g1052 371 Gene3D - 57 122 - -
Lele12g1052 371 MobiDBLite consensus disorder prediction 263 281 - -
Lele12g1052 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 23 357 IPR044823 -
Lele12g1052 371 MobiDBLite consensus disorder prediction 10 26 - -
Lele12g1052 371 MobiDBLite consensus disorder prediction 1 57 - -
Lele12g1052 371 Pfam Myb/SANT-like DNA-binding domain 54 141 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1052 Lele-ChrLele12 18012397 18014893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1052 46 170 Trihelix Transcription Factor Family AT3G14180 35.659 5.20e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele12g1052 Myb_DNA-bind_4 7.2e-19 CL0123