Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1051 ATGGCTCCGTGCTACTTTATCCCTAAAAGCTCCCGCATACGACAACTTCAACTGCAATCCAATTCCTTCCTTCATAAAAGGCGGCTATGTCCTCTTCTTCTCACTCAATCCACAACGCTTCTTTCACCTTCTTTCTTCTCTCTGAGCGAAACAACACAGAACTCAAATCCAATGGACGCTAAGCGTCGAGCGGTTCGCTCCTTTGTGGGCAAGCTGAGCTCTGTTTCAGAGCAAACCCAGCTCGATGCTCTGCGCGAGCTTCGATTGATGACCAAGCAGGACGAAGAAACCCGACCCTTGATCGCTGATTCGGGTGCGATTCCGTACTTGGCTGATTTCATCTTCTCCTCTTCCCACGTTTTCCAAGACAACGCCTCTGCGACGCTTCTCAACATTTCGATTTCCTGTAGAGAGCCTCTCATGTCCACGCGCGGAGTTCTCGATGCTATCTCGCACGTGCTTTCCCACCATACCTCGACTTCGTCTGTTTCCGCTGTCCAATCCTGCGCCGCCACGTTGTACAGCCTCCTCGTCGTCGATAACTACCGGCCTATCGTCGGTTCCAAGCGTGACATTGTGTACGCTCTCGTCGATATCATCAAGACCCCCAAATCGCCGATCAGATCGATCAAGGACGCTCTCAAGGCTCTGTTCGGAATCGCGCTTCATCCGCTTAATCGGTGCACGATGATCCAACTCGGTGCGGTTGAAGCTCTCTTCTCGTTGGTTCTGAAGGACCAGAAGGTCGTTGGGATTGTGGAGGATGCGACGGCGGTGATAGCGCAAATCGCGGGATGCGAAGAGAGTGTGGAAGCGTTTCGGAAGGTGTCAGGAATAGGAGTGCTGGTTGATTTTCTGGATATGGCGAATAAGTCGAGCATGAAGACGAAGGAGAATGCTGTTTCTGGATTACTGAAGCTAGTGAGATGTGGAGGGGAGAAAGTAGCCATGGATGTGAGAGTGAGAGCTTTAGGGGCATTTGATGGAATTGCGGACGTGCAAGAGAACGGTAGCTCCAAAGGGAAGAGCAAGGCGGCGGCGTTATCGGCGGAATTGATCGGAGATGTAAACCATTGGATTACACAGAGGGATTCGCGGTTTGATTCCTCAACAAGTCAAGATTCATCTTTTTCATTCAATTTCTCAACTGGATCATCAGAATTTGGTGTGCAGGATTAA 1179 0.5055 MAPCYFIPKSSRIRQLQLQSNSFLHKRRLCPLLLTQSTTLLSPSFFSLSETTQNSNPMDAKRRAVRSFVGKLSSVSEQTQLDALRELRLMTKQDEETRPLIADSGAIPYLADFIFSSSHVFQDNASATLLNISISCREPLMSTRGVLDAISHVLSHHTSTSSVSAVQSCAATLYSLLVVDNYRPIVGSKRDIVYALVDIIKTPKSPIRSIKDALKALFGIALHPLNRCTMIQLGAVEALFSLVLKDQKVVGIVEDATAVIAQIAGCEESVEAFRKVSGIGVLVDFLDMANKSSMKTKENAVSGLLKLVRCGGEKVAMDVRVRALGAFDGIADVQENGSSKGKSKAAALSAELIGDVNHWITQRDSRFDSSTSQDSSFSFNFSTGSSEFGVQD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1051 392 SUPERFAMILY ARM repeat 60 333 IPR016024 -
Lele12g1051 392 MobiDBLite consensus disorder prediction 365 392 - -
Lele12g1051 392 Gene3D - 42 356 IPR011989 -
Lele12g1051 392 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 234 278 IPR000225 GO:0005515
Lele12g1051 392 PANTHER U BOX DOMAIN-CONTAINING 37 353 - -
Lele12g1051 392 SMART arm_5 266 309 IPR000225 GO:0005515
Lele12g1051 392 SMART arm_5 94 134 IPR000225 GO:0005515
Lele12g1051 392 SMART arm_5 223 265 IPR000225 GO:0005515
Lele12g1051 392 FunFam ARM repeat superfamily protein 59 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1051 Lele-ChrLele12 18001380 18002558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1051 65 348 U-box Gene Family AT2G23140 32.753 9.58e-32 125