Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1018 ATGAGAATATCCACTCTCTATTCCATCCCCTTCCTCCTTTCCCTCCTCTGGTACAATTCATCTCTGTCCAGTGCCTACTCTGACATCGATGCTCTGCTCAAGGTCAAGGCTTCCCTTAAGGGATCCAAAGCTTCACTTTCTGCCATGGAGGATTGGAAACCCTCTGCTTCTCCCTCTGCTCACTGCAAATTCTCTGGAGTTTCCTGCGACGAGAATTTCGGGGTTGTCTCTTTGAATATCTCGTTCCAACCCTTGTTCGGCTTTATTCCGCCAGAGATCGGCCAACTGGACAAGCTTGTCTCTCTCACCCTTTCACAAGACAACCTCACCGGTGAGCTTCCCAAACAGATCGCCAATCTTACTTCTCTCAAGGTTCTCAATATCTCCCACAACGCCCTTACCGGAGACTTCCCTGGTGAAATCACTCTGGACATGACGGAGCTTGAGGTTCTAGACGTTTATGATAACAGCTTCAACGGCACGTTACCGGAGGAGGTAGTGAAATTGAAGAATCTGAAGCAGCTCTGGCTCGCCGGGAACTACTTTTCTGGCGACATACCAGAGAGTTATTCGGAGTTCGAGAGCTTGGAAATTCTGAAGCTGAATGAGAACAGCCTGAGAGGAAAAATCCCGGCGAGTTTGGCAAAATTGAAGAAGCTTAGGGGATTGTTTTTGGGGTATAGTAATGCGTACGAAGGAGGTATCCCACGGGAGCTAGGCAATATGAGGTCGCTTCAACTGATCGATTTAGCAAGCTGTAATCTATCCGGCGAGATTCCACCGAGCTTGGGCAATTTGAAGAACGTGAATTCTTTGTTCCTTCAAATGAACAACCTCACCGGAGAAATCTCACCTGATCTCTCCGGTATGACTAGCCTCATGTCGCTTGATTTATCCATCAACGGCCTCACCGGAGAGATACCCTCCAGTTTTTCCAAACTCACGAACCTAACTTTGATCAATTTCTATGAAAACAAGCTTCGTGGCCCTCTCCCTTCATTCATCGGAGACCTTCCGAATTTGGAAGTTCTTCTCGTTTGGGAGAACAATTTCTCGTACATATTGCCCAAAAATCTGGGCAGCAACGGGAGATTTAAGAAGATTGACGTCACGGGCAATCATTTCACCGGATTGGTTCCGAAGGATTTGTGTAAAGGAGAAAGGTTGGAGATTTTCATTCTCATGAATAATTCCTTCGATGGTCCAATTCCAGAGCAGCTCGGTGAGTGTAAGTCTTTGAGAAAAGTTCGAATTTCTAATAATTTCCTCAGTGGATCGATTCCTCCTGGGTTTTTCAATCTTCCATCTGCGTCGATGATCGACCTCAGCAACAACTTGTTATCCGGCGAGCTACCGTCGGATATGTCAGGTGATGTTCTCGGGATTTTGACACTTTCTTATAATTCATTCACCGGGAAAATTCCCCCGGCTATAGGAAAGCTCCGGAGCTTGCAGAATCTTCAACTAGACGTGAACCACTTTGCTGGCGAGGTTCCCGAGGAAATGTTCAACTTGCCGATGCTGACGAAGGTGAACATCAGCTTCAACAATCTCAGTGGTCCGATTCCTGATTCCATCACTCACTGTGCTTCCTTAACCGCTGTTGATCTCAGCGGGAACAAGCTCATCGGAGAAATCCCTAGAGCGATCAATAACATAACTGATCTCAGCATCCTCAACCTTTCAATGAACCACCTAACAGGTTCAATCCCAGACGAAATCCGTTACATGGTGAGCCTGACCACACTCGACCTCTCCAACAACAACCTCGAAGGCAGAATCCCCTCCGGAGGCCAATTCAGCGTCTTCTCCGCCGAGAGCTTCGCCGGAAACCCCAAACTCTGCTTCCCCCAAGACCACAACTGCAAATTACCCCAAAAGACCCTCAAATCCACCAAAATCATCGTCATAACAATACCCCTCCTCACCACCCTCCTCTTCATCCTCATCACAATCTACACAATCCGAAAACGAAAGCAACACAAATCCCTGACCTGGAAGCTCACCTTGTTCCAACGTCTAAACTTCAAAGTCGACGACGTCCTCGAATGCTTAAAGGAAGAGAACATAATCGGAAAAGGCGGTGCAGGGATCGTGTACAGAGGTTCCACCAGAGAAGGCACTGAAGTGGCGATCAAGAGACTGGTGGGTGGTCGGAGTGGCCGGAACGATTACGGGTTCAAGGCGGAGATAGAGACGTTAGGGAGGATCAGACACAGGAACATAGTGAGGCTATTAGGTTACGCATCGAACAACGACACGAACTTGTTGAGTACGCTTACACACTGA 2289 0.4779 MRISTLYSIPFLLSLLWYNSSLSSAYSDIDALLKVKASLKGSKASLSAMEDWKPSASPSAHCKFSGVSCDENFGVVSLNISFQPLFGFIPPEIGQLDKLVSLTLSQDNLTGELPKQIANLTSLKVLNISHNALTGDFPGEITLDMTELEVLDVYDNSFNGTLPEEVVKLKNLKQLWLAGNYFSGDIPESYSEFESLEILKLNENSLRGKIPASLAKLKKLRGLFLGYSNAYEGGIPRELGNMRSLQLIDLASCNLSGEIPPSLGNLKNVNSLFLQMNNLTGEISPDLSGMTSLMSLDLSINGLTGEIPSSFSKLTNLTLINFYENKLRGPLPSFIGDLPNLEVLLVWENNFSYILPKNLGSNGRFKKIDVTGNHFTGLVPKDLCKGERLEIFILMNNSFDGPIPEQLGECKSLRKVRISNNFLSGSIPPGFFNLPSASMIDLSNNLLSGELPSDMSGDVLGILTLSYNSFTGKIPPAIGKLRSLQNLQLDVNHFAGEVPEEMFNLPMLTKVNISFNNLSGPIPDSITHCASLTAVDLSGNKLIGEIPRAINNITDLSILNLSMNHLTGSIPDEIRYMVSLTTLDLSNNNLEGRIPSGGQFSVFSAESFAGNPKLCFPQDHNCKLPQKTLKSTKIIVITIPLLTTLLFILITIYTIRKRKQHKSLTWKLTLFQRLNFKVDDVLECLKEENIIGKGGAGIVYRGSTREGTEVAIKRLVGGRSGRNDYGFKAEIETLGRIRHRNIVRLLGYASNNDTNLLSTLTH 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1018 762 Gene3D Ribonuclease Inhibitor 25 252 IPR032675 -
Lele12g1018 762 Gene3D Ribonuclease Inhibitor 351 625 IPR032675 -
Lele12g1018 762 SUPERFAMILY Protein kinase-like (PK-like) 670 755 IPR011009 -
Lele12g1018 762 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Lele12g1018 762 Pfam Protein tyrosine and serine/threonine kinase 686 755 IPR001245 GO:0004672|GO:0006468
Lele12g1018 762 ProSiteProfiles Protein kinase domain profile. 685 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g1018 762 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 303 757 - -
Lele12g1018 762 SMART LRR_typ_2 145 169 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 290 313 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 120 144 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 242 266 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 577 600 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 338 362 IPR003591 -
Lele12g1018 762 SMART LRR_typ_2 481 505 IPR003591 -
Lele12g1018 762 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 285 381 - -
Lele12g1018 762 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 382 457 - -
Lele12g1018 762 Gene3D Phosphorylase Kinase; domain 1 650 758 - -
Lele12g1018 762 Pfam Leucine Rich repeat 120 135 IPR001611 GO:0005515
Lele12g1018 762 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515
Lele12g1018 762 Pfam Leucine Rich Repeat 579 596 IPR001611 GO:0005515
Lele12g1018 762 FunFam Leucine-rich repeat receptor-like protein kinase 189 281 - -
Lele12g1018 762 Pfam Leucine rich repeat 482 542 IPR001611 GO:0005515
Lele12g1018 762 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 458 525 - -
Lele12g1018 762 Gene3D Ribonuclease Inhibitor 253 350 IPR032675 -
Lele12g1018 762 FunFam Leucine-rich repeat receptor-like protein kinase 25 188 - -
Lele12g1018 762 SUPERFAMILY RNI-like 345 603 - -
Lele12g1018 762 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 759 - -
Lele12g1018 762 FunFam Leucine-rich repeat receptor-like protein kinase 531 623 - -
Lele12g1018 762 SUPERFAMILY RNI-like 77 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1018 Lele-ChrLele12 17777729 17781235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1018 25 757 Receptor kinase-like Gene Family AT1G75820 57.873 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele12g1018 PK_Tyr_Ser-Thr 2.7e-06 CL0016