Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1012 ATGAAAGTAGAATGCAGGGGCTTCTACCTACATCGTCTCCTTGGAACGTGTGCTAGGTATACTGAAGTTCGTGACTTTCACAATGCAAGTGAAGCAATCGAGAACATTGCTAGTGTTGCCTGCACTGATGGTGATCCGATGCAGAGAGTAGCAAGTTACTTAAATAAGGGACTTGCTTGCAGGTTGGTAAAGAATATTCGTGGTGTGCCTGAAGCCCTAGATCTGTCAAATCCCTTGCCAAGCTTAGTGCAACAGTATACAAGAAAGTTGTTCTTTGACTTTCTCCCATTCTTGAAGTTTTCTTATCTCATCACCAATCAGGCTATTGTTGACACCATGCAAAGAGAACAAGTGTTTCATATTATGGATCTTAATGCCTGTGATGCTACTCAATGGATATATCTTCTTCATACTTTGAAGGAACAACACCAGGGAGAGCAACTACCTTTTCTGAAGATTACTGGGATTCATGAGGACAAAGATGTTTTGGAACAAATAGGGTTTCAATTGATTCAAGAAGCACAGAAACTGAACATACCCTTCCACTTCTATCCAATTGTAAGCCAATTGGAGAATCTTTGCTTTGAGAAATTGCCTTTGAAGCCAGGAGAGCCCCTTGCTATAAGTTCAGTTATTCATCTTCATTCTCTTCTGGCAGTGGATGATCAAATCAGTCCTGATTCAGTCTTGCCACACGATCCTTTGGCTTTGCAATGTGTTTCGCCAAAGATGAAGAGGTTTCTAAATAGCCTTTGGAAACTTCAACCGAGGTTGATGGTCATTACAGAACAAGAATCAGATAACAATGGACCTTCTCTGACAGACAGGCTTGATAAGGCACTAAACTTCTACGCTGCACTGTTTGATTGCTTGGAGGCTACTGTTCCAAGAGCAAAAGCAGCAGAGAGAATCATGCTCGAAAAGATGCTTTTCGGGGAGGAGATAAAGAACATCGTTGCTTGTGACGGAGTTGATAGAAAAGAGAGGCACGGCAAGATTCTGAAGACATGGAGACCATTGCTTGAATTGGCCGGCTTCATGAGGGTTCCTATGGACTATGAGAGAATGTTGCAGGTAACCAGGCCATTGCAGAGCTATGGGAGTGGATACAAGTTGGTAGAGTTCAATCAATGTTGCAGTTCAAGCTCAAGCTCAAGCTCAAGTTCAACATACCAATGGCTCGCAGAAATGGGATGGGAAGCGAAGGGCATTTTAATTGCCCGTCTTCTTCCCCACTGTGTTAAATTTACCGAAACCGGCGATGTCATGAAAGTCGTAAGCACCCTCCAGAAAATCGCAAATCTCACCCGCCCCGATGGCGACGCCCTTCAGCTCGTCGCCACTTACGCCAACGAAGGCCTCGCTCATCGGATGCTCAACGAGTACATACCCGGACTGTCGGAATCGCTCCGTCTGACGAATCGCTTATCGGCATCGGAGCTAGTGCTTGTCCGGAGGCTCTTCCGAGAGTTGTGTCCCTTCTTGATGTTCTCATACTGA 1500 0.4493 MKVECRGFYLHRLLGTCARYTEVRDFHNASEAIENIASVACTDGDPMQRVASYLNKGLACRLVKNIRGVPEALDLSNPLPSLVQQYTRKLFFDFLPFLKFSYLITNQAIVDTMQREQVFHIMDLNACDATQWIYLLHTLKEQHQGEQLPFLKITGIHEDKDVLEQIGFQLIQEAQKLNIPFHFYPIVSQLENLCFEKLPLKPGEPLAISSVIHLHSLLAVDDQISPDSVLPHDPLALQCVSPKMKRFLNSLWKLQPRLMVITEQESDNNGPSLTDRLDKALNFYAALFDCLEATVPRAKAAERIMLEKMLFGEEIKNIVACDGVDRKERHGKILKTWRPLLELAGFMRVPMDYERMLQVTRPLQSYGSGYKLVEFNQCCSSSSSSSSSSTYQWLAEMGWEAKGILIARLLPHCVKFTETGDVMKVVSTLQKIANLTRPDGDALQLVATYANEGLAHRMLNEYIPGLSESLRLTNRLSASELVLVRRLFRELCPFLMFSY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1012 499 ProSiteProfiles GRAS family profile. 1 411 IPR005202 -
Lele12g1012 499 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 408 499 IPR005202 -
Lele12g1012 499 Pfam GRAS domain family 11 378 IPR005202 -
Lele12g1012 499 Pfam GRAS domain family 408 499 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1012 Lele-ChrLele12 17714187 17718126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1012 386 499 GRAS Transcription Factor Family AT1G50420 35.345 3.48e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g1012 GRAS 3.9e-88 CL0063