Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1010 ATGGAGACGAAACAACAGGAAAAAGTAAAGATCTTGCACCGTCCTTTGACATCCAACAATTTGAAGCCTCTCTGGCGTATTGATCTTCATATAATGGAAGAAGCTGCAGATTTATCAAGGCACTACCTCAGTGGCCTAAATGGGGAAGAGAGGGGCATACTTCTAGTTCGTCAGCTTTTCACCTGTGCTAAGTTTATTGAAAATGGTGAGTTCAAGAACGCAGGCGTTGCACTCAAGGACATTGCTTACGTTGCTTCACCAGATGGAGACACAATGCAGAGGCTAGCTACTTACTTCAAAATGGCGTTTAGTTACAGGCTGATCAAGCAAATTCCCCATGTTCCTGGCGTCTTTTGTTGTCTGGCAAATAATCCCTGGTCAACCTTAGAACGAGAACATGCCAGAAACTTGTTCATTGACTTTATCCCATTCTTGAAGTTCGCTTATGAGATCACCAACCAGGCTATTGTTGATGCCATGCAAACAGAACCAGAGTTTCATATAATTGATCTCAATGCCGCCACCAGCAATGCTACTCAATGGATATATTTTCTTCATACTTTGAAAGAACAACGCCAACAGGAAAATAACCCTCTACCTCTTGTGAAGATCACCATGATACATGAGAATAGAGATACTTTGCAACGTGTGGGATCTGAATTGATTCAGGAAGCTCAAAAGATGAACATGCTGGTCCACTTCCATGGCATCGCGAGCCAACTAGAGAACATTTGCTTTGAGAAATTGCCTTGGATCAAGCCAGGAGAGCCACTAGCTATAAGCTGTATTCTTATTCTTCACTCTCTTCTTGCAGTAGTTGATGATCAATTTACCAGTCCTGATGATGTGCTACTTAAGATGAGGATGTTTCTGAATCAGCTTTGGAAACTCCATCCCAGGGTGATGGTGATTACAGAACAAGAATCAGATAACAATGGCCCTACTTTGAGCGATAGGCTTGATAAGGCACTGAACTTTTATGGTGCACTTTTCGATTGCTTGGAAGCTAATGTTCCAAAAGAGAGAGAAATAGGGAGAATAATGGTGGAGAGGATGATTCTTGGGGAGGAGATAAAGAACATTATTGCTTGTGATGGAATTGAGAGAAAAGAGAGGCATGGAAAGTTCTTGAAGACATGGAGTCCATCGCTTGAATTGTCTGGATTTAAGAACGTGCCTATAAATTATGAGAGAATGTTGCAGGCGACGAGGTTATTCATGCAGAGACATGGAAGTGAATACAAGTTATTAGACAACAATCAATGTCTGTTTACATGCTGGAAAGACCTTCCGCTCTACTCTACATCAGCCTGGAATTAA 1320 0.4174 METKQQEKVKILHRPLTSNNLKPLWRIDLHIMEEAADLSRHYLSGLNGEERGILLVRQLFTCAKFIENGEFKNAGVALKDIAYVASPDGDTMQRLATYFKMAFSYRLIKQIPHVPGVFCCLANNPWSTLEREHARNLFIDFIPFLKFAYEITNQAIVDAMQTEPEFHIIDLNAATSNATQWIYFLHTLKEQRQQENNPLPLVKITMIHENRDTLQRVGSELIQEAQKMNMLVHFHGIASQLENICFEKLPWIKPGEPLAISCILILHSLLAVVDDQFTSPDDVLLKMRMFLNQLWKLHPRVMVITEQESDNNGPTLSDRLDKALNFYGALFDCLEANVPKEREIGRIMVERMILGEEIKNIIACDGIERKERHGKFLKTWSPSLELSGFKNVPINYERMLQATRLFMQRHGSEYKLLDNNQCLFTCWKDLPLYSTSAWN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1010 439 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 435 IPR005202 -
Lele12g1010 439 Pfam GRAS domain family 55 438 IPR005202 -
Lele12g1010 439 ProSiteProfiles GRAS family profile. 46 439 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1010 Lele-ChrLele12 17702697 17705858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1010 41 438 GRAS Transcription Factor Family AT1G50420 37.946 3.93e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g1010 GRAS 1.2e-95 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0262 09 1850994 1853054 Lele12g1010 12 17702697 17705858 hybridization
Lele10g0255 10 1688240 1689445 Lele12g1010 12 17702697 17705858 hybridization