Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g1009 ATGTTTTCATCAGACCCAGTCACCTTCTACATAAACCCTCATCATAAGAAATGTAAAGCTTACTCAAATTTGAAATATTTGCTTCCCAGGAAGCTTCAAAACCTCCTTCCTGGTTTGGTTTCTTATCAGCTGGCAGGTTTCTGTGAAGATTTTCTAGTTGATTTTCTTGTTTTGTTTAGGGAAGAGCAACCTTATATGGAGTCTGGCTCACCTTACCAGTGGCTAAGAGAACTGAGATGGGACAATGGAGGCTTCAACCCAATCTCTGTTCTTCTTGACTGTGCAAAATGTGTAGCAACTGGAAGCATTAAGAACGCAGATATGGCTCTTGAGTTCATCTCCCACCTTGCTTCTCCTGATGGTGATGCAGTCCAGAGAATGGTCACTTATTTCAGTGAAGCCCTAGCTTACAGAATCATCAAGAACCTACCAGGTGTTTATAAAGCCCTTCATTCCTCAAAACCCTCATCAACCTCTGAACAAATCTTGGTCCAAAAATACTTCTTTGAACTCTGTCCTTTCCTGAAACTTGCCTACTTGACCACAAACCAAGCCATTGTTGAAGCCATGGAAGGTGAAAAGCTTGTTCATATAATTGACCTTCATTCTTCTGAACCTGCACAGTGGGTTGACCTTCTCATGACTCTCAAGAAACGCCCAGAAGGCCCTCCTCATTTGAAAATCACAGGGATTCATGAGAAGAAAGAGGTTTTGGATCAAATGGGTCTTCTTTTGACCACTGAAGCAGGAAAACTTGACTTCCCTTTGCAGTTTAATCCAATTGTGAGCAAATTGGAAGATCTTGATGTAGAAAACTTGCCTGTTAAGTCAGGTGAAGCTCTTGCCATAAGTTCAGTTCTTCAGCTTCATTCTCTTCTTGCAAGTGATGATGAAGTTTCTGCAAGAAACTCACCAGCCACACCCATGAATCTGCAGAGAGCTGTTTATCACCACCATCATCATCAGCAACACATGAGCCAGAGGACGTTTGCAGAATATTTAGAGAAGGACATGCTCAATGCTTATATCTCAAGTCCAGATTCAGCATTATCACCACTTTTTCTCAGTGCTTCTCCTAAAATGGGTATGTTTCTGAACTCTTTAAGGAAACTGCAACCAAAACTGATGGTGATCACTGAGCAAGAATCAAACCTTAATGGTTCAAACCTGATGGAGAGGATAGAGAAGGCACTGTATTTCTACAGTCCATTGTTTGATTGCTTGGATTCAACTGTTTCAAGGACTTCACCAGGGAGACAGAAGCTTGAGAGTGAACTACTTGGAGAACAGATAAAGAGGATCATTGCTTGTGAGGGTTTTGAGAGGAAAGAAAGGTATGAGAAGCTTGAGAAGTGGATTCCAAGGATGGAAATAGCTGGTTTTAGGAGAGTGCCATTGAGTTACTTTGGGATGTTGCAGGCAAAGAGATTGTTGCAGAGTTATGGGTATAAGTATAAGATTAGAGAAGAGAATGATTGTTTGCTTTTGTGTTGGAGTGATAGGCCACTTTTTTCTGTATCAGCTTGGAGTTTCAGAAGATAA 1542 0.4125 MFSSDPVTFYINPHHKKCKAYSNLKYLLPRKLQNLLPGLVSYQLAGFCEDFLVDFLVLFREEQPYMESGSPYQWLRELRWDNGGFNPISVLLDCAKCVATGSIKNADMALEFISHLASPDGDAVQRMVTYFSEALAYRIIKNLPGVYKALHSSKPSSTSEQILVQKYFFELCPFLKLAYLTTNQAIVEAMEGEKLVHIIDLHSSEPAQWVDLLMTLKKRPEGPPHLKITGIHEKKEVLDQMGLLLTTEAGKLDFPLQFNPIVSKLEDLDVENLPVKSGEALAISSVLQLHSLLASDDEVSARNSPATPMNLQRAVYHHHHHQQHMSQRTFAEYLEKDMLNAYISSPDSALSPLFLSASPKMGMFLNSLRKLQPKLMVITEQESNLNGSNLMERIEKALYFYSPLFDCLDSTVSRTSPGRQKLESELLGEQIKRIIACEGFERKERYEKLEKWIPRMEIAGFRRVPLSYFGMLQAKRLLQSYGYKYKIREENDCLLLCWSDRPLFSVSAWSFRR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g1009 513 Pfam GRAS domain family 89 509 IPR005202 -
Lele12g1009 513 ProSiteProfiles GRAS family profile. 78 510 IPR005202 -
Lele12g1009 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 89 506 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g1009 Lele-ChrLele12 17696041 17698297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g1009 66 513 GRAS Transcription Factor Family AT1G50420 53.493 8.09e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g1009 GRAS 4.9e-122 CL0063