Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0995 ATGAATTTGTTGACAGTAAGCTTTTTTTGTTCCATGGTAAATAAAGAAAATATGGATGATGGAGATATTGAGCTTTCAGATAGTTTCTTATTGTCGAATCCAGAATCATCTAGCAATGTTCAGTCTTCATCAACATCCATGAATAAAATCAATGAATTCTTCAGGAACACCAGAACATGCACCCATACTCATACATGCAACCCTCCTGGCCCTGATGAAGCACATACCCACACATGTTACCACACACACACACAACTCATTGCGTCTGAAGAAGATGATCATACAGATGATAAGGAGCATACCAACACAAAACGAAAACGGCCTTCGGGTAATAGAGAAGCTGTTCGAAAGTATAGGGAGAAGAAGAAGGCACAGACAGCTTACCTAGAGGAGGAAGTTAAGAAATTGCGCCTGCAGAATCAGCAATTAGTTAGGAAACTACAAGGGCATGCACTTCTTGAAGCTGAGGTTTTGAGGTTGAGGAGCATTCTGGTTGACCTCAAGGGGAAAATTGACAATGAGTTGGGTGTTTTCCCCTATAAAAAGCAGTGTAATAACTCTTCTTCAATCCTTAAAGAGGGGCACACCGATATGCTGCTTAAGGGTCATGGGACTGGTCTTCAATGTCAAACCAATTTCCAATGCTTTGATCACCAAGCAGGATTATCATCTCATGTTGATATATGTGGAAATGAAAATTTTATGATTCCATGTGAAGGGAACTGTCAAAATCTTGCCATTAACTGTCAAGTTAACACAAATAACATGCCAAATACTGAATGGCAAGTTGTAGACTCAGTGGATAACTTGACAGATGAGTAA 822 0.3966 MNLLTVSFFCSMVNKENMDDGDIELSDSFLLSNPESSSNVQSSSTSMNKINEFFRNTRTCTHTHTCNPPGPDEAHTHTCYHTHTQLIASEEDDHTDDKEHTNTKRKRPSGNREAVRKYREKKKAQTAYLEEEVKKLRLQNQQLVRKLQGHALLEAEVLRLRSILVDLKGKIDNELGVFPYKKQCNNSSSILKEGHTDMLLKGHGTGLQCQTNFQCFDHQAGLSSHVDICGNENFMIPCEGNCQNLAINCQVNTNNMPNTEWQVVDSVDNLTDE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0995 273 Gene3D - 89 168 - -
Lele12g0995 273 SMART brlzneu 99 166 IPR004827 GO:0003700|GO:0006355
Lele12g0995 273 SUPERFAMILY Leucine zipper domain 104 149 IPR046347 GO:0003700|GO:0006355
Lele12g0995 273 CDD bZIP 104 157 - -
Lele12g0995 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 101 167 IPR004827 GO:0003700|GO:0006355
Lele12g0995 273 PANTHER CCAAT/ENHANCER BINDING PROTEIN 14 179 - -
Lele12g0995 273 Coils Coil 119 146 - -
Lele12g0995 273 MobiDBLite consensus disorder prediction 87 118 - -
Lele12g0995 273 Pfam Basic region leucine zipper 104 156 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0995 Lele-ChrLele12 17562617 17563564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0995 18 182 bZIP Transcription Factor Family AT2G16770 50.602 9.61e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele12g0995 bZIP_2 1.3e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0995 12 17562617 17563564 Lele12g0995 12 17562617 17563564 ECH
Lele10g0282 10 1886610 1887264 Lele12g0995 12 17562617 17563564 hybridization