Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0988 ATGATGCGAACGCTTTCAAGATACCACAAATGCTTTAATTCTTCAGAGGCTGCTGTGGTGGAAAGTAAGACAGAGATTATCATCTCACAATTTCTTTTTCAGAAGGAAGATCCTAAGACAGTGGAGACTCTGAAAGAAGAAATTGCAAAGCTAGAAAAGAAGCAGTTGCGGTTGCTGGGTAAGGACCTGACTGGTTTGAATTTAAAAGAATTGCACCAGCTTGAGCAGCAACTTAACGAAGCATTATTGTCTATCAAGGAGAAGAAGGTGTTTCTCATTGAGGAATTGCTTATGGAGCAACTGGAGCAGTCGAGAGTACAGGTCGAGGAGCTTCGCTGTTTGTTTCCGATAACCGAGCATGTGGTCCCATCTTTTCTTCAAGACCACCATGTGGAAAGAAGGGTCGCCCCTGTAAATAATGGTGTCATATGTTCCAACTTGATCAGTAAATATGAAAATGAGAATGGAGATTCAGACACTACCTTGCATTTAGGGTTGCCCACTGATGGTCATCACAAGAGGAAGGCACCTGAGAAAGAAACAATCTCCAAAGACTCTGAATCTCAAATGGCTCTTCTCTGA 582 0.4244 MMRTLSRYHKCFNSSEAAVVESKTEIIISQFLFQKEDPKTVETLKEEIAKLEKKQLRLLGKDLTGLNLKELHQLEQQLNEALLSIKEKKVFLIEELLMEQLEQSRVQVEELRCLFPITEHVVPSFLQDHHVERRVAPVNNGVICSNLISKYENENGDSDTTLHLGLPTDGHHKRKAPEKETISKDSESQMALL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0988 193 MobiDBLite consensus disorder prediction 158 193 - -
Lele12g0988 193 MobiDBLite consensus disorder prediction 166 185 - -
Lele12g0988 193 Pfam K-box region 39 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele12g0988 193 ProSiteProfiles K-box domain profile. 34 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele12g0988 193 Coils Coil 68 88 - -
Lele12g0988 193 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0988 Lele-ChrLele12 17511754 17514287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0988 1 191 MADS-box Gene Family AT5G13790 35.545 6.27e-28 104