Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0986 ATGAGCACAGAAACTTGCTGGTGGCTCCTTTTCCTTCTCTCAACACTACTCTTTGTGGATGAAATCCATGGAAGCAGAAAGCAAGAACATGCTCTCAGGAATCTGAACAAAGCCAAGTTCTGGGGAGGTTCCATTGACAGAAGCAGTGAAACAATCTTGGGGGTAGATAATGAGGCCGTGTTTGGCGACCCTGATTCTCGTTACTATTATCCTCAACAAGGTTTGAAGGAGAAAGATAGAATAGAGAAACTTCCAGGGCAACCTCAAGGTGTGAGTATCTCTCAGTATGGAGGATACGTGACTGTGGATAAAATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAGTCTCAACAATCTCATCATACCCACAAATTGCCACTTCTTCTTTGGCTCAATGGAGGTCCAGGATGTTCATCACTTGCGTATGGAGCAATGCAAGAACTTGGACCATTCCGAGTTAACAGTGATGGCAAAACACTTCAAACAAACAAATATTCTTGGAACCATGCTGCAAATGTATTGTTTTTAGAATCACCAGCAGGAGTGGGGTTTTCGTATTCAAATAGGACATCAGATTATGACAATAATGGGGACAGAAAAACTGCTTCAGACAACTATGTGTTCTTGAGGAACTGGTTGGAGAGGTTTCCTGAGTATAAGAATTCTGAATTCCACATTGCTGGAGAGAGCTATGCTGGGCATTATGTTCCTCAACTTGCTCACACCATTCTCCATCACAACAACCATCCCAATTCTACTTTCTTTATCAACCTCAAAGGCATCTTGATAGGGAATGCAGTGATAAATGATGAGACAGACACCAAAGGAATATTGGATTTTTTGGCAAGCCATGCCATAACATCAGACCAAGTAGCTCATGATGTCAACAGATTGTGTGATTTCTCAGGAGCTGTCTCAAACCAGAGCAGTGGATGCATGGCAGCTTTATCTGAATTGGAAGACGATATTAGCTTCATTAATATTTACAACATCTATGCTCCTCTATGCCATGATTCTAACCTCACTTCCTTCCCTAAGCCTGCCTCGGCAGTGACAGATCCATGTAGTGATTATTATGTGTCTGCATACTTGAACCGAGCAGAGGTACAAGAGGCATTGCATGCCAATGTGACAAAGCTCACGCATGACTGGGAGCCTTGTAGCGATGTTATAACTCGATGGGTTGATAGTGCTTCTACTGTGCTTCCCCTCTTGCATGAGTTCCTCAATCATAGCCTTCAAGTTTGGATCTTTAGTGGAGATATAGATGGGAGAGTGCCAGTAACTTCAACTAAGTATTCTCTTGAGAAGATGAATCTTTCAGTTAAGACTGCTTGGCATCCCTGGTTTGTCAACCGAGAGGTAGGAGGGTACACAGAGGTATACAAGGGAGGTTTAACATTTGCAACAGTGAGAGAAGCAGGACATCAAGTGCCAAGCTATCAGCCAGCAAGAGCCCTTTCTTTGGTCACTCACTTCTTAAAAGGCAGCCCTCTTCCTAATACCACCCACCTTGCCCCTTGA 1527 0.4309 MSTETCWWLLFLLSTLLFVDEIHGSRKQEHALRNLNKAKFWGGSIDRSSETILGVDNEAVFGDPDSRYYYPQQGLKEKDRIEKLPGQPQGVSISQYGGYVTVDKIAGRAFYYYFVESQQSHHTHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNHAANVLFLESPAGVGFSYSNRTSDYDNNGDRKTASDNYVFLRNWLERFPEYKNSEFHIAGESYAGHYVPQLAHTILHHNNHPNSTFFINLKGILIGNAVINDETDTKGILDFLASHAITSDQVAHDVNRLCDFSGAVSNQSSGCMAALSELEDDISFINIYNIYAPLCHDSNLTSFPKPASAVTDPCSDYYVSAYLNRAEVQEALHANVTKLTHDWEPCSDVITRWVDSASTVLPLLHEFLNHSLQVWIFSGDIDGRVPVTSTKYSLEKMNLSVKTAWHPWFVNREVGGYTEVYKGGLTFATVREAGHQVPSYQPARALSLVTHFLKGSPLPNTTHLAP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0986 508 Gene3D alpha/beta hydrolase 75 339 IPR029058 -
Lele12g0986 508 ProSitePatterns Serine carboxypeptidases, serine active site. 227 234 IPR018202 GO:0004185
Lele12g0986 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 213 238 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 467 480 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 176 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 187 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 Gene3D - 402 497 - -
Lele12g0986 508 SUPERFAMILY alpha/beta-Hydrolases 77 501 IPR029058 -
Lele12g0986 508 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 80 484 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 FunFam Carboxypeptidase 402 497 - -
Lele12g0986 508 Pfam Serine carboxypeptidase 85 497 IPR001563 GO:0004185|GO:0006508
Lele12g0986 508 FunFam Carboxypeptidase 75 339 - -
Lele12g0986 508 Gene3D - 356 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0986 Lele-ChrLele12 17494230 17500859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0986 364 500 Calmodulin-binding Proteins AT2G22960 28.467 5.71e-14 68.6