Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0967 ATGAGCCTCTGCCGGGATGACGACATTGATGTCACGGGCGACGCTGGTCAAAAAGACTACATCAATTACACTGTCATGATGCCGCCCACACTGGACAACCAGCCCGACGGTGCCGCCAGCTCTTCCTCCGGAACGTCACGGTTCGCATCCGAGCCTCAACAAAACCGCAGCGCCAGCGGCGAGGGGAGTGGGAGTGGGGCGAAGTTTGATAGAAGACTGCCGGTGTTGAATTCCGTGAACAACAAGTTGATGCTGTCGAGAAGTCAGACTCAGGATTTTGTTCACAACCGATGGTTGTTCGAGACAAGAGGAACATATGGAATCGGAAACGCATATTGGCAGGACGACGAGTATGTCGTCGGATTTCATGGACAAACCTTGGAAACCTCTAACTCGGAAAGTTTAATGTTGGGATTATTTCTTCCATTGAAACAGCGTATTGCAGGTTTAGGGCATAGCCTTTTCCAGAAGGCTTTAGTGGACTACTGGTTCACTGGACATAATAGGGTTAAGAGATTGGACCCAAGGTTTTGGCCAGGAAAGAAGGGTATGGAGGCTGCGGTCGTCGACGCTGGCTCAAAGCTCCTCAAAGCGGGATTCGCTATCCCCGATCAGGCTCCAGCTATGATAATTCCTACCCAGATGAAACGCATGCTTGATGATGGATCAGTGACTGATAATTCATTAGTTGATGATGTTACCATCGATCCAATTGTGAGAGGGTTTGTGAGAGATTGGGATGCAATGGAGGATTTGTTGCACCATGTTTTATATACTGGCTTGGGATGGGAAATTGGCAATGAAGGGCAAATTCTATTTACAGATCCTCTTTGTACGCCAAAGGCTAATAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGCTTTTATGCCTCAGAACAAGCAGTGCTCTCACTATATGCTGTGGGACGTATCTCAGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCAGTAATCGAGGGTGCTGTTCATCACATTGCCTCAAAAAGATTTGAGTTTGGAGGCATTGATTTAGCAAATTTCTTGGCTCAAGAACTCAGCAAGTCAAATCCACTTGTAAGCATCAGCTTGTCTGAGGTTGAGAAAATAAAAGAGCAATGCTCATGTTGTGCTGAGGACGAATTAGCTTATCAGAAGACCCAGGATTCTTGTGTTCCAGAGAAACATACCCTGCCTGATGGACAGGTGATAACTATTGGGAGGGAAAGATATACCGTAGGCGAAGCTTTATTCCAGCCATCTCTATTGGGTTTAGAGACACATGGAATCGTTGAACAGCTTGTACGAACTATTTCAACTGTGTCATCAGATAATCATCGGCAACTGCTGGAAAATACTGTGGTTTTTGGTGGCCCTTCTACTATGACTGGTTTTGAAGAAAGGTTTCACAAGGAAGCTAACCTGACTTCATCTGCTATTCGACCAACTCTCGTTAAGTGCTGTATGCTTCAAAAATCATATCAGCATCTCTATTCATGTTCTGTTCTTCGTCCCTGTTCTTGTCTTATTGCAGCCTCCAGAATACATGCCAGAAAATTTAACCACATATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTCCCACAAAATCAGCACGTAACGAAGGCGGAGTACGACGAAACTGGACCTTCCATCGTTCACCGGAAATGTTTCTGATGGCATTTGTTGGTGGTACAAGCTCTGCAAATGTGCAGTTTCTTCACACCAACTTGTTATGTAACAGGTAG 1782 0.4512 MSLCRDDDIDVTGDAGQKDYINYTVMMPPTLDNQPDGAASSSSGTSRFASEPQQNRSASGEGSGSGAKFDRRLPVLNSVNNKLMLSRSQTQDFVHNRWLFETRGTYGIGNAYWQDDEYVVGFHGQTLETSNSESLMLGLFLPLKQRIAGLGHSLFQKALVDYWFTGHNRVKRLDPRFWPGKKGMEAAVVDAGSKLLKAGFAIPDQAPAMIIPTQMKRMLDDGSVTDNSLVDDVTIDPIVRGFVRDWDAMEDLLHHVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASKRFEFGGIDLANFLAQELSKSNPLVSISLSEVEKIKEQCSCCAEDELAYQKTQDSCVPEKHTLPDGQVITIGRERYTVGEALFQPSLLGLETHGIVEQLVRTISTVSSDNHRQLLENTVVFGGPSTMTGFEERFHKEANLTSSAIRPTLVKCCMLQKSYQHLYSCSVLRPCSCLIAASRIHARKFNHIFCMGGRCHTCQSSFPTKSARNEGGVRRNWTFHRSPEMFLMAFVGGTSSANVQFLHTNLLCNR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0967 593 Pfam Actin 184 483 IPR004000 -
Lele12g0967 593 FunFam Actin-related protein 7 348 435 - -
Lele12g0967 593 Gene3D Actin; Chain A, domain 4 348 435 - -
Lele12g0967 593 SMART actin_3 184 528 IPR004000 -
Lele12g0967 593 FunFam Actin-related protein 7 187 310 - -
Lele12g0967 593 PANTHER ACTIN 187 499 IPR004000 -
Lele12g0967 593 SUPERFAMILY Actin-like ATPase domain 314 484 IPR043129 -
Lele12g0967 593 PRINTS Actin signature 283 296 IPR004000 -
Lele12g0967 593 PRINTS Actin signature 206 215 IPR004000 -
Lele12g0967 593 PRINTS Actin signature 308 327 IPR004000 -
Lele12g0967 593 PRINTS Actin signature 400 416 IPR004000 -
Lele12g0967 593 Gene3D - 306 483 - -
Lele12g0967 593 MobiDBLite consensus disorder prediction 34 62 - -
Lele12g0967 593 SUPERFAMILY Actin-like ATPase domain 184 321 IPR043129 -
Lele12g0967 593 MobiDBLite consensus disorder prediction 26 69 - -
Lele12g0967 593 CDD NBD_sugar-kinase_HSP70_actin 187 369 - -
Lele12g0967 593 Gene3D - 188 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0967 Lele-ChrLele12 17391981 17398318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0967 184 517 Cytoskeleton Gene Families AT5G09810 34.085 1.64e-49 174