Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0962 ATGATAATGGGGAGGGACAAGAACAGTAGTAAGAACAATAACAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAAGATGAGAAGCTGATAAGGTACATGTTGACGAATGGACGAGGTTGTTGGAGTGACATTGCCAGAAATGCAGGCCTTCAACGTTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGAGAGGTGCTTTCTCTCTCCAAGAAGAACAACTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGATAATGAGATCAAGAATTTCTGGAACTCAACTTTAAAGAAAAGGATGAAAAACAACACTACTTGTACTTCTGCAACTACTACTACTACTTCCGCTGCAACTCCTTCACCAAACAACAGTACAGATTCATCATCAAATCATCATATTATTCTGAATGGCATCACCCCCACCACCACCACTTCCTCCATGCCCTTCATGAACATGAACATGAACATGTGCATGGACTCATCACCTTCATCAATATCATCGTCTTCATCAGCGTCCGTACAATCCATGCAAGCCGCAGCTTTTGGTGGTGACCGCCGGTTAAATATGGAGTATCCCTTTTCCATGTTGAATAATAACAGTCATATTCCTTATGACATGCCTGCATGCTTAACCCTAGTTGGTGGTGGTTGTGGTGGCCATGGCATGGTGGAGGATGGGTTTTATGCTGAAGATTATAATAATAATAATCGGATGGTGTTAGGGGAAGAAGATAGTAGAATAATGGGGTTAGAAAGAGACCTGTGTCTTCCTCCTCTAGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTACTGGTGTTGCTATTGATCATGTGAGAAGTCATATCAACAACAACAACCATTTTAATAATGGTTGCTTCAATAACACGGATCATCACCATCATCATCAGGACTTGGTTGGGTTTGGAAATAATAATAATCATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1113 0.4178 MIMGRDKNSSKNNNNNVVKLRKGLWSPEEDEKLIRYMLTNGRGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTTCTSATTTTTSAATPSPNNSTDSSSNHHIILNGITPTTTTSSMPFMNMNMNMCMDSSPSSISSSSSASVQSMQAAAFGGDRRLNMEYPFSMLNNNSHIPYDMPACLTLVGGGCGGHGMVEDGFYAEDYNNNNRMVLGEEDSRIMGLERDLCLPPLESRSMEEKYNSTGVAIDHVRSHINNNNHFNNGCFNNTDHHHHHQDLVGFGNNNNHGQSGENLRMGEWDLEGLMQDISSFPFLDFQVE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0962 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 69 IPR017930 -
Lele12g0962 370 PANTHER MYB DOMAIN PROTEIN 55 3 319 - -
Lele12g0962 370 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Lele12g0962 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Lele12g0962 370 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Lele12g0962 370 MobiDBLite consensus disorder prediction 127 155 - -
Lele12g0962 370 CDD SANT 25 69 IPR001005 -
Lele12g0962 370 FunFam MYB transcription factor 19 75 - -
Lele12g0962 370 Gene3D - 76 148 - -
Lele12g0962 370 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Lele12g0962 370 SMART sant 21 71 IPR001005 -
Lele12g0962 370 SMART sant 74 122 IPR001005 -
Lele12g0962 370 Gene3D - 19 75 - -
Lele12g0962 370 Pfam Myb-like DNA-binding domain 25 85 - -
Lele12g0962 370 CDD SANT 77 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0962 Lele-ChrLele12 17329089 17331541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0962 5 370 MYB Transcription Factor Family AT3G08500 43.666 1.19e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele12g0962 Myb_DNA-bind_6 2.7e-13 CL0123