Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0958 ATGACAGTCGCCATGGTTGATCAGGTTAATCACTCCAGCATCATAAAAAAGGTTGCTGGCAGATTCCATCTCCAATCTGGTGATATTGAAGGTTATGATAACAGTTTCAGTCGACCTGCTCTCTACCAAAGACGATCATTTGGGAATTACTCAAATGCTGCCCTGCTGCAGTATCCATCAATGCCAGCATGTAGACAATCAACTGAAATTTGTACTATTGCTGCAACAACAGGCTCGCCAATCTTTGCTGCTGCTCCAGCTGAGAAAGGACATTTCCTTGTGGACTTTCTTATGGGTGGAGTTTCAGCTGCTGTATCAAAAACTGCTGCTGCTCCCATTGAACGTGTCAAACTTTTGATACAGAATCAAGATGAGATGATTAAAGCCGGTAGGCTTTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTAACCGAACAATTCAATCTGAAGGTGCTGCTTCCCTTTGGAGAGGTAACACTGCCAATGTCATCCGTTATTTCCCCACACAGGCCTTGAACTTTGCTTTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGACAAGGATGGCTACTGGAAATGGTTTGCAGGCAACTTGGCCTCTGGAGGAGCTGCTGGTGCTTCATCTCTGCTCTTTGTTTACTCCCTCGACTATGCTCGAACCCGTCTGGCGAATGATGCAAAGGCGGCGAAGAAGGGTGGAGGAGAAAGGCAATTCAATGGACTTGTTGATGTCTACAAGAAGACCTTGGCTTCTGATGGTATTGCTGGACTTTACCGTGGTTTCAACATCTCATGTGTTGGAATCATTGTGTATCGTGGTCTTTATTTCGGAATGTACGATTCCCTGAAGCCAGTGCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTTGCAAGCTTTGCATTGGGATGGCTTATCACCAATGGTGCAGGGCTAGCATCATACCCCATTGATACTGTTAGAAGAAGGATGATGATGACCTCTGGTGAAGCAGTCAAGTACAAGAGCTCCATGGATGCATTTGCTCAAATTCTCAAGAATGAAGGCTATAAGTCCTTGTTCAAGGGAGCTGGTGCCAACATCCTCCGTGCGGTCGCCGGAGCTGGTGTGCTCGCCGGTTATGACAAGCTACAGGTATTAGTGTTCGGCAAGAAGTATGGATCTGGTGGTGCTTAA 1182 0.4594 MTVAMVDQVNHSSIIKKVAGRFHLQSGDIEGYDNSFSRPALYQRRSFGNYSNAALLQYPSMPACRQSTEICTIAATTGSPIFAAAPAEKGHFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFNRTIQSEGAASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGERQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGYKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0958 393 PRINTS Adenine nucleotide translocator signature 195 208 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 PRINTS Adenine nucleotide translocator signature 92 104 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 PRINTS Adenine nucleotide translocator signature 169 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 PRINTS Adenine nucleotide translocator signature 301 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 PRINTS Adenine nucleotide translocator signature 136 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 87 392 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele12g0958 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 382 IPR018108 -
Lele12g0958 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 288 IPR018108 -
Lele12g0958 393 FunFam ADP,ATP carrier protein, mitochondrial 93 389 - -
Lele12g0958 393 Pfam Mitochondrial carrier protein 91 187 IPR018108 -
Lele12g0958 393 Pfam Mitochondrial carrier protein 297 384 IPR018108 -
Lele12g0958 393 Pfam Mitochondrial carrier protein 194 291 IPR018108 -
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Lele12g0958 393 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085
Lele12g0958 393 Gene3D Mitochondrial carrier domain 93 389 IPR023395 -
Lele12g0958 393 SUPERFAMILY Mitochondrial carrier 91 378 IPR023395 -
Lele12g0958 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 183 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0958 Lele-ChrLele12 17311648 17313482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0958 5 393 Antiporters AT5G13490 80.457 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0335 11 3398122 3408127 Lele12g0958 12 17311648 17313482 ECH
Lele12g0958 12 17311648 17313482 Lele12g0958 12 17311648 17313482 ECH
Lele09g0337 09 2395023 2399214 Lele12g0958 12 17311648 17313482 hybridization
Lele10g0321 10 2149373 2151206 Lele12g0958 12 17311648 17313482 hybridization