Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0944 ATGGCTCAGAGAACGGAAAAGGAAGAAACCGATTTTAAGGTGCCTGAAACCATAATCCCCTGCGTCAACAACTGCGGCGTCACCGGAAATCCGGCTACCAATAATATGTGCCAGAACTGCTTCAACGCCTCCTCAACCTCTTCGTCATCTGCCTCTTCCTCTGCCGTTGGAGTTTCAGCGCCTTCTAAATTTGTCGATGACAACTCTTCTTCTAGATCTACCGCTTCTCGGTCTCCTAAGAGATCCTATCCTTCCGACGAGTCTACACAAACGACAGATCGGGCGAAGACGGACGAGGTGGTTCCGTCTGAAGCGAAGCGGATGGTGACTCGGTGCTCCGGATGCCGGAGGAAGGTCGGGTTGACGGGGTTCCGGTGCCGGTGCGGGGAGCTGTTCTGTGCTGAGCATAGGTACTCCGATCGTCATGATTGCAGCTACGACTACAAAGCTGCCGGACGTGAGGCGATTGCGAGGGACAATCCGGTGGTCAAAGCCGCGAAGATCGTGAAAGTTTGA 516 0.5407 MAQRTEKEETDFKVPETIIPCVNNCGVTGNPATNNMCQNCFNASSTSSSSASSSAVGVSAPSKFVDDNSSSRSTASRSPKRSYPSDESTQTTDRAKTDEVVPSEAKRMVTRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARDNPVVKAAKIVKV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0944 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Lele12g0944 171 Gene3D - 84 167 IPR035896 -
Lele12g0944 171 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Lele12g0944 171 FunFam Zinc finger AN1-type containing 6 84 167 - -
Lele12g0944 171 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Lele12g0944 171 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 68 - -
Lele12g0944 171 Pfam AN1-like Zinc finger 112 149 IPR000058 GO:0008270
Lele12g0944 171 MobiDBLite consensus disorder prediction 47 90 - -
Lele12g0944 171 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Lele12g0944 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Lele12g0944 171 SUPERFAMILY AN1-like Zinc finger 94 165 IPR035896 -
Lele12g0944 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 62 - -
Lele12g0944 171 MobiDBLite consensus disorder prediction 47 103 - -
Lele12g0944 171 Gene3D - 1 83 - -
Lele12g0944 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0944 Lele-ChrLele12 17194434 17194949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0944 8 171 C2H2 Transcription Factor Family AT3G52800 38.372 5.47e-32 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0944 12 17194434 17194949 Lele12g0944 12 17194434 17194949 ECH