Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0931 ATGTGGAGATTTAAGCCATTCACACATAAAGAGTCGGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATCTTAAAATAAATGTTCAAAAGGCCATCGCTGAAGGGGGCTTCTCTTGTGTCTACTTGGTACGTGATGCTATACACATGTCAAAACAGTTTGCTTTGAAGCACATTATATGCAACGATGAAGAATCCCTTGGATTGGTCAAGAAGGAGATCTCAGTGATGAAGTCATTGAAAGGGCATCCTAATGTCGTCACCCTTTATACACATGCAATTTTTGATATGGGCAGGACAAAAGAGGCATTCCTTGTTTTGGAATTCTGTGAAAAGTCTCTGGTGAAGGTGCTGGAGAGCAGAGGAGCGGGGTATTTTGATGAGCAACATGTCTTATTGATCTTGAGGGATATATGCAATGCAGTTTTTGCAATGCACTGCCAATCCCCACCTGTTGCTCACCGAGACTTAAAAGCTGAAAATCTTCTATTAGCTTCCGATGGCTTGTGGAAATTGTGTGACTTTGGAAGCACATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGAAAGAACACAACTCCTGCCTATAGGGCCCCTGAGTGGACATATGGGAGTGCATTTGATGGAGAATCCAAGCTTCAAGTTCTTAATGGAAACTATCGCATCCCTGATTTACCTAAATACAGTTCATCCATTGTAGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGACATTCATCTCCATGAATTTAGGATTGCTAATGTTGGATAATTTACCATGGTGGCAGGTCTGGTTTCGCGTTAATGAGCAGTTACCTATTAATTTGCAGAAGTCATTACCTGATACACCACCTGAATTTTCTTCTTCCAGCAATCATGAAGGTGCTTCAAAGCCTGCTAACAGATCAACCCCAGTGCCTCGTAGGACTTCATCACAGTCATCCCTTTCTTCTAGGGGAGGTGGAGGTGGGGGCCAACTTGGTGCTTTCTGGTCCACTCAGCATGCACAAAAATCACTTGCCACAGAAGGAAAGGGTAGATCCATATTTGAAGACCCAGCTAGCCATCCTATTTCATCAAAACTTGATAGAATTCATCCAGAGAATAATCAATTACCTAATAATGTTAGCCCTAACAAAGTGGTCAATGCCCAATCCCAAACTTTGAAAAGCATTTCACATGGAAAAACAAACAAGCCTGATACTAGTTCTTCCAAGGACTTTGAAATAAAAAATTTTCAGGGTCAAGATCATAGTAGTGAGAAGCTAATGTCATCGAATATAGGAAACCCAACTACTTTTAAAAACCAGGCTTGTAACGCTTTTGTTGCTGAATTTGATACAATTAAATTCAACTCTGTACCCAGTCATGAATCTGGTAGGGAAGTAGCATTAGAGTCTGAGGTGGAGAAACTCAAGGAGCAGCTGAAGGAAGTTAACTTAGAAAAAGCCGAAATAACTTCCAAGTATGAAAAACTCACTGCTATCTGCCGATCTCAAAGACAAGAACTCCAAGATCTCAAGCTGGCATTTGGGGCTAAAACTCCATCACCAAATAAGGAGGCTCTTAGAACACCTTCAACAGTTGCAATATCTACAGCTATGAGATATGGGATACTTCAGGAACAAGCACAAAGTATAGCTGAATGGAAAACTCCTGGCTCAGAACCTAAGTCATCATGGCAAGCTTTTCCAGAGGAACCCCTGCCACAGCGGTCTGTTCAGCAAAATAATCAGCCTGCCCAGCCAACTAGTAATTTCAGTTCTTGGGCGTTTGGAGCAGAAAACTTTTCTACTATCCATATTGGAAACCCACAAATGCCTAGGCATACTACTGATGGGAGTAATTCTCAGGCTAAGTCTTCTTATGAGAGCAAGTCAGCTTCTCAACCTGCAGGATGGGCTGGTTTTTAA 1989 0.4213 MWRFKPFTHKESAGLEGRTIDVGNLKINVQKAIAEGGFSCVYLVRDAIHMSKQFALKHIICNDEESLGLVKKEISVMKSLKGHPNVVTLYTHAIFDMGRTKEAFLVLEFCEKSLVKVLESRGAGYFDEQHVLLILRDICNAVFAMHCQSPPVAHRDLKAENLLLASDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKNTTPAYRAPEWTYGSAFDGESKLQVLNGNYRIPDLPKYSSSIVDLIRDMLQARPDDRPDITQASALLDWTFISMNLGLLMLDNLPWWQVWFRVNEQLPINLQKSLPDTPPEFSSSSNHEGASKPANRSTPVPRRTSSQSSLSSRGGGGGGQLGAFWSTQHAQKSLATEGKGRSIFEDPASHPISSKLDRIHPENNQLPNNVSPNKVVNAQSQTLKSISHGKTNKPDTSSSKDFEIKNFQGQDHSSEKLMSSNIGNPTTFKNQACNAFVAEFDTIKFNSVPSHESGREVALESEVEKLKEQLKEVNLEKAEITSKYEKLTAICRSQRQELQDLKLAFGAKTPSPNKEALRTPSTVAISTAMRYGILQEQAQSIAEWKTPGSEPKSSWQAFPEEPLPQRSVQQNNQPAQPTSNFSSWAFGAENFSTIHIGNPQMPRHTTDGSNSQAKSSYESKSASQPAGWAGF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0931 662 MobiDBLite consensus disorder prediction 304 404 - -
Lele12g0931 662 ProSiteProfiles Protein kinase domain profile. 27 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0931 662 Pfam Protein kinase domain 29 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0931 662 Coils Coil 487 535 - -
Lele12g0931 662 MobiDBLite consensus disorder prediction 389 404 - -
Lele12g0931 662 Gene3D Transferase(Phosphotransferase) domain 1 11 273 - -
Lele12g0931 662 MobiDBLite consensus disorder prediction 595 654 - -
Lele12g0931 662 SMART serkin_6 27 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0931 662 SUPERFAMILY Protein kinase-like (PK-like) 28 265 IPR011009 -
Lele12g0931 662 MobiDBLite consensus disorder prediction 304 346 - -
Lele12g0931 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lele12g0931 662 MobiDBLite consensus disorder prediction 595 662 - -
Lele12g0931 662 PANTHER SERINE/THREONINE PROTEIN KINASE 1 655 - -
Lele12g0931 662 MobiDBLite consensus disorder prediction 413 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0931 Lele-ChrLele12 17114272 17116952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0931 26 252 CBL-interacting serine-threonine protein kinases AT5G58380 30.290 1.13e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lele12g0931 Pkinase 4.5e-28 CL0016