Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0930 ATGGTGGTAGCATCCCAAACCGCAAGCATAAACTTAGGATCATCTCTATTAGCTTCTAAGGATTCTTCATCTTCATGGTTATCACCATCTGGGGATTTGCTTTTGGCTTTCGTGCCACAAACAATGATGAAAATCTCTAGTTTCTTGCCATCTGGTTCTAATTATGTGTGGGAGCTCTTCAAGAACCCTACAGATACCTTGCTTCCAAGTCAGGTCCTGGAAATTGGTGGTAAGCTAACTTCAAAGCAAATGGACAGAAATTATTCAAAGGGGAAGTTTCAACTTCGAATTCAAGATGATGGAGATGTAGTTCTTCAACCCACTGCCCTAGCTACGGATTTTGCTTATGCGCGTTATTTCAGCAGTAAAACAGCTAAAAATTCTGATAGGATTCTGGGTATCGCTTGGGAAACACTAGATTTTGATGGGATTTTCACTGAGTATGCTCATCCCAAGAACAACAAAAGTAGGAACTTGGGTTCTTGGATCACTGTTTGGTCTATACCTGATGATATTTGCTCAGATATGAGTGGTGATTTAGGAGGATGTCTTTGTGGTTACAATGGAATTTGCAGACTTGATGCTAATAGAAGGCCAATTTGTGATTGTCTTCCTTGGTTTTCCCCATTGGATCCAACTAACAAGTTCAATGGCAAACTAGACAAGCAGATAACTTGTGAAACAAGAAGGCACATGTTGGAAGAAGAAATTGCCTCACAAGATTGGGATGTCAATGGGAAGGCTCTGATAAAATTTCCCAAATTTGATGATGTTCCTTCAGATGATGAATCCTTTTCAGAGGATAATACAAACACAGGGAAGAAGGATCAAGCAACCTTGATTTTAGCAAAAGCACTTCTATTACATGCAAATCTTCAAACTTTCACCTACAAAGACCTAGAAGAAGCCACAGATGGATTCAAGGAAGAATTAGGAAGAGGTGCTTTTGGTACTGTGTATAAAGGGGTTATATTCTCATCAAGTTCAAGAACCTATGTTGCTTTGAAGAAGCTGGACGGGAGAAAAGGAGTTCAGAACAGAAATTTTAGGTTGGTGAAGCTTCTTTTGAGTGATCAAACTCGAACCCATACAATGATTAGAGGGATAAGAGGGTACGTGGCACCGGAACGGTTCAGGAACACTCCTATTAGCGTGAAAGTAGATGTTTATAGCTATGGAGTGATGTTGCTGGAGATTTTATTTTGCAGGAAAAGCCTTGACATGAAAAAGAGAATGAAGAGGAAGGGATACTTGTTGACTGGCTTTATGACTGCTATAAAGCAAGAAGATTAA 1293 0.3975 MVVASQTASINLGSSLLASKDSSSSWLSPSGDLLLAFVPQTMMKISSFLPSGSNYVWELFKNPTDTLLPSQVLEIGGKLTSKQMDRNYSKGKFQLRIQDDGDVVLQPTALATDFAYARYFSSKTAKNSDRILGIAWETLDFDGIFTEYAHPKNNKSRNLGSWITVWSIPDDICSDMSGDLGGCLCGYNGICRLDANRRPICDCLPWFSPLDPTNKFNGKLDKQITCETRRHMLEEEIASQDWDVNGKALIKFPKFDDVPSDDESFSEDNTNTGKKDQATLILAKALLLHANLQTFTYKDLEEATDGFKEELGRGAFGTVYKGVIFSSSSRTYVALKKLDGRKGVQNRNFRLVKLLLSDQTRTHTMIRGIRGYVAPERFRNTPISVKVDVYSYGVMLLEILFCRKSLDMKKRMKRKGYLLTGFMTAIKQED 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0930 430 ProSitePatterns Protein kinases ATP-binding region signature. 311 336 IPR017441 GO:0005524
Lele12g0930 430 Gene3D Transferase(Phosphotransferase) domain 1 350 428 - -
Lele12g0930 430 Gene3D Phosphorylase Kinase; domain 1 262 349 - -
Lele12g0930 430 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 348 423 - -
Lele12g0930 430 SUPERFAMILY Protein kinase-like (PK-like) 292 405 IPR011009 -
Lele12g0930 430 Gene3D - 53 137 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0930 Lele-ChrLele12 17110945 17113080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0930 348 406 Receptor kinase-like Gene Family AT5G20050 50.847 1.37e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele12g0930 None None None