Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0927 ATGGAAAACCATCCCGGAAGCCCAGACACTAATCCACACCACCACAAGTGGGGGACCTTGGATGAGCTCTTACTTGCCTACGCCGTCCAGCGTCATGGCTCTAAGGATTGGGACGCCGTCGCCATGGAGGTTCAGACCCGAACCACCCTCCCCCACCTCCTCGTCACCGCCCACCACTGCCGCCAGAAATTCCTCGATCTCAGACGCCGATTCGCCGCCCACCGCGACGATGCCGTCCCCGACAACGTCGCCGCCGGGGACGACGTCGATCATGTCCCGTGGCTTGACGAATTAAGGAAGCTCCGTGTCGCTGAACTCCAGGCAGCCGTCCAGCGCTCCGACCTGAAGGTGAAGAAGTTGGAGGACGAGAGAGGGAAGAGTTTGAAGGAAAACGTCGGACAAGAGGGAGAAAAACCAGATCAGGGCGTCTCCGGCGACCTGAAATCGCAAAACGACAAAAAAGGCGGACCTGAAAAAATTCTTGGGCCGGCGAGTGCCGAACCGGCAACGCGGCTCGATGAGGATCTTAATATTAAGCAACCGACAAGTGACGAATCCGACCGGGAAAACCTATCCGTGAATGAGTCTAACTCGACGGTTTCCGTTGGGAAAACCGGGGAGGGAGAAGTTAAACTAGAACCGAACCCGGTCCATAACGGCCCGAATGAACCGGATGCGGTCGAGAGGAAGGCCAATCCGCTCGGAGAAGAATCTAATAACGGAAGCTACGATGCGGCGGCGAAAGTGCCAACGGGGGGTTCACTTCCACCGAGCGAGGAGAGGAAGGTGGAGGACTCGTCTGAGTTGCGAGACTCGGTGACGCACTCGAGGGATGGTGGTGGCGAGGGAGGGATGAGGGAGAGCAGTGAGGTGCAGAGCTCGGCGAGTTTGACGAAGAAAAGAAAGCCGAGGCGAAGGAAGGAGGAGGAGGAGGAGGAGCTGCTGGAGAACGACGAGGAGGCCGTGAAAGTTCAGCCGTTGAAAGGGGTGTTAGATTTAATCAAAGGTCACGATCACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGGGAGTAGAAAAATACAAAAACATAGTACGACAGCCAATGGATTATGAAACCATACAACGGCGACTCCGAAACGGCACTTATTCCCGCTGCACTCATGCTTTCTTCCGTGATATCCTCCTCCTCTTCACCAACGCCGCCGCCCTCTTCCCTAAAGACTCTGCTGAATCATGCGCTGCACATCAGTTGGGCCACCTTGTCTCGGCCGAGATTGCACACCACATCCCGGTGACCCGACCGGAGCCACCCCCATCCAACCCATCATCGTCATCAAAACCAAACCCCGATTCACTTTTGTCAAAACACAAAGCTTCTGCTCCTATATTGGTCTGCAGGAAACGCAGTGCATTCTTAGCTAAACCTTCTACTTCCTCCGCTACCTTTGGCCAAAAGAAGAAGCCAGCTTCAGATACAAGACCACCCCCGTTGAAGCCATCTTCTGATACAGATGATGAACCTCCCCAGAAAAAGGAAATGCCGGTCACCAGAGTAAGAAGCCTGAGAAGGAGCAACAAAAACCTCACCGACAACTCCACCAAGAAGACAGGCACGGCCAGCAAGCCACCAGAGCCGCCGAAACCAGATAAGAACAAAGCGGAGGCTTCTGCAGGATCAGATAAAAAGAGGAGCGCAGCAGCGGATTTCTTAAAAAGGATAAAGCGAAGTGCTCCGGCGGAGTCATTGAGAAGTAGTGGTGGTAATAGTAGCAAAGGTGGGGGAAGTAGCGGGAAAGACCAGAAGAAGATGATCAGTGTTGGCAAAGGGGACAAAGGGAAAGAAAAAGCGATCAAGCTGGGCGGCGGCAGTAGCAGCTCCGGCGACAAAAAGAATGAGAATGAGAACAGTAGTCAATCGAAGAGGAGTGTAGGGAGGCCTCCGAAGAAGGTGGCAGGAAGTAGTAATGTTTCAGCAAAGCGTGGGAGGGAAAATGGTGGAAAGGATAAAAGGCCCAAGAAGCGATCTAAGAGTGAAGGCATCGCTAGCTTGGATATATTCCTTTGTCTTTACGACTTAATCAGAGATCCTTGGGTCAACATCGAACAGAAAGAAATTAATAACGTCAAGCAGGAGAAGGCAAGAGAGAGAGAGAGAACATCGGAACAACCATAG 2157 0.5327 MENHPGSPDTNPHHHKWGTLDELLLAYAVQRHGSKDWDAVAMEVQTRTTLPHLLVTAHHCRQKFLDLRRRFAAHRDDAVPDNVAAGDDVDHVPWLDELRKLRVAELQAAVQRSDLKVKKLEDERGKSLKENVGQEGEKPDQGVSGDLKSQNDKKGGPEKILGPASAEPATRLDEDLNIKQPTSDESDRENLSVNESNSTVSVGKTGEGEVKLEPNPVHNGPNEPDAVERKANPLGEESNNGSYDAAAKVPTGGSLPPSEERKVEDSSELRDSVTHSRDGGGEGGMRESSEVQSSASLTKKRKPRRRKEEEEEELLENDEEAVKVQPLKGVLDLIKGHDHSSLFERRLESQGVEKYKNIVRQPMDYETIQRRLRNGTYSRCTHAFFRDILLLFTNAAALFPKDSAESCAAHQLGHLVSAEIAHHIPVTRPEPPPSNPSSSSKPNPDSLLSKHKASAPILVCRKRSAFLAKPSTSSATFGQKKKPASDTRPPPLKPSSDTDDEPPQKKEMPVTRVRSLRRSNKNLTDNSTKKTGTASKPPEPPKPDKNKAEASAGSDKKRSAAADFLKRIKRSAPAESLRSSGGNSSKGGGSSGKDQKKMISVGKGDKGKEKAIKLGGGSSSSGDKKNENENSSQSKRSVGRPPKKVAGSSNVSAKRGRENGGKDKRPKKRSKSEGIASLDIFLCLYDLIRDPWVNIEQKEINNVKQEKARERERTSEQP 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0927 718 MobiDBLite consensus disorder prediction 515 534 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 619 638 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 576 591 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 172 191 - -
Lele12g0927 718 SMART bromo_6 316 425 IPR001487 GO:0005515
Lele12g0927 718 Coils Coil 305 325 - -
Lele12g0927 718 Coils Coil 103 123 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 598 612 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 540 573 - -
Lele12g0927 718 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lele12g0927 718 CDD SANT 16 48 IPR001005 -
Lele12g0927 718 ProSiteProfiles Bromodomain profile. 335 406 IPR001487 GO:0005515
Lele12g0927 718 Pfam Bromodomain 328 405 IPR001487 GO:0005515
Lele12g0927 718 MobiDBLite consensus disorder prediction 493 514 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 258 284 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 656 673 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 469 673 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 425 449 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 695 718 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 700 718 - -
Lele12g0927 718 CDD Bromodomain 327 420 - -
Lele12g0927 718 MobiDBLite consensus disorder prediction 126 319 - -
Lele12g0927 718 SUPERFAMILY Bromodomain 323 424 IPR036427 GO:0005515
Lele12g0927 718 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 9 671 - -
Lele12g0927 718 Coils Coil 693 713 - -
Lele12g0927 718 Gene3D - 288 425 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0927 Lele-ChrLele12 17091275 17096031 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0927 Bromodomain 5e-12 No_clan