Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0904 ATGGAAACTCCAGTGAACATCATCGTTGGATCACATGTCTGGGTTGAGGATCCTGAGATTGCTTGGACTGATGGTGAGGTCACAGAAATCAATGGCAGCGACGCCACCATCATTACTACAGATGGGAAAACCATAGTTTTTGGTTTAATAACGGATTTACATCAGAACAGAATTGAATCTGAGAGAAACTGTTGCAATGTTTCTCATAGTATCAGAACAGAACCAATATCAGGTTTGAAATCTAACTGCCAATTTCTTGAAGCCAAACGACTAGGAATTTCCTTGTCGTGTAGGGTGAGGCCTATTTTCGATCAGCCTAAGAAGGCAGATTAG 333 0.4144 METPVNIIVGSHVWVEDPEIAWTDGEVTEINGSDATIITTDGKTIVFGLITDLHQNRIESERNCCNVSHSIRTEPISGLKSNCQFLEAKRLGISLSCRVRPIFDQPKKAD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0904 110 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele12g0904 110 SUPERFAMILY Myosin S1 fragment, N-terminal domain 12 46 - -
Lele12g0904 110 Pfam Myosin N-terminal SH3-like domain 9 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0904 Lele-ChrLele12 16938391 16938965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0904 1 49 Myosins gene family AT1G08730 63.265 3.29e-16 71.2