Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0903 ATGGAACAAGAAGAATACACGAAAGAGGAAATCAACTGGAGCTATGTAGAATTTGTGGATAATCAAGATGTTCTTGATCTTATTGAAAAGAAACCTGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTCCCCAAGTCAACACATGAGACATTTGCCCAAAAATTGTATCAGACATATAAAGCACACAAGCGTTTTAGCAAGCCCAAACTTGCAAGAACAGATTTCACAATTAATCATTATGCTGGAGATGGAGTACTCGAGGCAATTCGGATTAGTTGTGCTGGTTATCCGACAAAACGAACATCTGATGAGTTCCTTGATCGTTTTGGAATGCTAGCCCCTGATGTCCTAGATGGATCTGACGAGAAAACAGCATGTGTTGCTATATGCGATAAGATGGGATTAAAAGGCTATCAAATGGGAAAAACGAAGGTATTTCTGAGAGCTGGTCAGATGGCTGAATTAGATGCAAGAAGGGCTGAAAAGCATGCACGAGCACACACTGCAAGAATGCATTATACATCATTGCAAGCATCAGCAATAGTTATCCAGTCAGGGTTAAGAGCAATGGCAGCACGAAATGAATTCAGATACAGACAAAGAACAAAGGCTGCAATCATAGTTCAGGCTGCAAGGGAAACTGGGGCACTTAAGGAGGCGAAGGACAAGTTGGAGAAGCGTGTTGAAGAGCTTACATGGCGACTAGATATTGAAAAGCACATGAGGATTGATCTTGAGGAAGCTAAAGGGCAAGAAATTGCTAAGTTACAGAATGCTTTACAAGAAATGCAAACTCAGCTTGATGAAGCTCATGCTGCAATTATACACGAGAAGGAAGCAGCTAAACTGGCAATTGAATCGGCACCACCAGTGATCAAAGAGGTACCTGTCGTCGACAATACCAAGCTCGAGTTACTAACAAGTAAAAATGAGGAGCTAGAGAGTGAAGTAGAAGAACTGCAGAAGAAGATTGAAGAATTTCAGGTAAAGTGTTCAGACATGGAAAAGGAGTCTCAAGAAAGAATGAAAGAGGCTGAAGAAGCACATCTGAAAGCAACGCAACTTCAGGATACTATTGAAAGATTAGAGTCAAATTTGTCAAACCTTGAGTCTGAGAATCAAGTTCTAGGCCATCAGGCTTTGGTTGAATCAAAAAATGAGGAACTCTCCGAGGAGCTTAAAACCCTCAAGGAGAAGATTGCAAGTCTAGAATCAGAGAATGAAATTCTTCGGAGCCGGCCAGCAGCTACTGTGGTTCATAAGGAACCAAGACAACCAGTCTCCTTCCTCATTAGACAAAGATCGCTCACCGAAAGGCAGCAGAGTCAAGAAGGAATCAATGACTTAGCATATTGGCTCTCTACAACTTCAACATTATTGTTTTTCCTACAAAGCACACTCAAGGCAAGCAACTCAACTAAGGCAGCAGCTCGTAGTAATCGAAACTCCCCTGCCACTTTATTTGGCAGAATGGCACAAGGCTTGCTTTCATCCTCCATGGGCATGGGGGTTTCAAGTGGCTACAGTGGAATGGTGGGAAAACCAAATGAACAATCAAAAGTGGAAGCAAATTTGTTGCTTCGTCGCGAGTGCTGCTCGTTCAGCAATGGAGAGTATTTGAAGGCAGGTTTGCATGAGTTGGAACAATGGTGTATCAAGGCAACTGGTCAGGTCTCGCACCAAAAGACACAAAAATCTTTGGATGAGATAACAAGTGAAGTATGTTCGGTGTTAAGTATCCCACAAATATATCGTATTGGAACCATGTTCTGGGATGACAAATATGGAGCACAGGGGTTATCTCAAGAAGTAAATCCTTGA 1827 0.4215 MEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTYKAHKRFSKPKLARTDFTINHYAGDGVLEAIRISCAGYPTKRTSDEFLDRFGMLAPDVLDGSDEKTACVAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEKHARAHTARMHYTSLQASAIVIQSGLRAMAARNEFRYRQRTKAAIIVQAARETGALKEAKDKLEKRVEELTWRLDIEKHMRIDLEEAKGQEIAKLQNALQEMQTQLDEAHAAIIHEKEAAKLAIESAPPVIKEVPVVDNTKLELLTSKNEELESEVEELQKKIEEFQVKCSDMEKESQERMKEAEEAHLKATQLQDTIERLESNLSNLESENQVLGHQALVESKNEELSEELKTLKEKIASLESENEILRSRPAATVVHKEPRQPVSFLIRQRSLTERQQSQEGINDLAYWLSTTSTLLFFLQSTLKASNSTKAAARSNRNSPATLFGRMAQGLLSSSMGMGVSSGYSGMVGKPNEQSKVEANLLLRRECCSFSNGEYLKAGLHELEQWCIKATGQVSHQKTQKSLDEITSEVCSVLSIPQIYRIGTMFWDDKYGAQGLSQEVNP 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0903 608 Gene3D - 1 100 - -
Lele12g0903 608 Gene3D - 101 159 - -
Lele12g0903 608 ProSiteProfiles IQ motif profile. 178 207 IPR000048 GO:0005515
Lele12g0903 608 Gene3D - 160 213 - -
Lele12g0903 608 SMART DIL_2 526 598 IPR002710 -
Lele12g0903 608 Coils Coil 209 243 - -
Lele12g0903 608 Coils Coil 347 415 - -
Lele12g0903 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 203 IPR027417 -
Lele12g0903 608 PANTHER MYOSIN 86 604 - -
Lele12g0903 608 Coils Coil 248 282 - -
Lele12g0903 608 Coils Coil 305 339 - -
Lele12g0903 608 ProSiteProfiles Myosin motor domain profile. 88 162 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0903 608 ProSiteProfiles Myosin motor domain profile. 1 87 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0903 608 ProSiteProfiles Dilute domain profile. 392 608 IPR002710 -
Lele12g0903 608 SMART MYSc_2a 1 163 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0903 608 Pfam Myosin head (motor domain) 86 150 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0903 608 Pfam Myosin head (motor domain) 2 85 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0903 Lele-ChrLele12 16924567 16935503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0903 1 90 Myosins gene family AT2G31900 88.889 1.60e-48 181