Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0889 ATGTCTCTGTTCCAGACCCTGTTGAACCAAAGTGACTTGTTCGAGCCTTTTCGAGTTTTTCTCAATGAAAATTCAGAAACCCAGATGGATTGGAGGGAGACCCGAGAAGCGCATATCTTCGAAATGGATCTTCCTGGGCTTACCAAAGAGGATGTGAAGCTCGAAGTTCATGAAAACAGAGTTCTCTGTATCAGGGCAGAGAGAAAAGGAGGAGGAGGAGGAGACAATGACGAGAGCAAAGAGGAGGAGAAGAGCCTCAGATGGCATTGCAAGGAGAGAGAAACCATTAGAACCATCTCGAGGAAATTCAGGTTACCTGAGAATGCGAAGGTTGAAGCAATTAAGGCCTCAATGAGCGATGGGGTGTTGAAAATTACAGTGCCTAAGGATGAGACCAAGAAGAAGCACAAGCAGCAGCAGAAGAAAGCAACTACTACCAAAAACATGAAGCTCTTCCATGTTTCTGTGATTTTGGTTCTGGTTATTACTTGCTGTCTAGAAGCAGAGGCAAATGTGAGGAAGAAATCAGCGAATTCCTTATTACCGCCAGAAGAATTGCTTTCAAGTGGTCACTATCATAGAACATGCCCTGATGCTGAAGCCATTATCAACCAGAAGGTTGTAACTTGGGTTAAAAAGGACCCCACTTTGGCTCCCTCCATCATCCGGCTTCACTTCCATGATTGTGCTGTTAGGGGATGCGATGCATCGATTCTGCTGAACCATGCAAACGGTGAGAGGGCAGCTTATGAGAGCAGAACCCTACGAGGATTCCAAGTGATAGATGACATAAAAGCAGAAGTAGAGAGAAGATGCCCTAAAACTGTGTCTTGTGCAGACATTCTCACTGCTGCTGCAAGAGATGCCACCATTTTAGCAGGAGGCCCATTCTGGGAAGTCCCATTTGGCCGCAGAGATGGAAGAATCTCCATAGCCAAAGAAGCCAGCTTTGTCCCTCAAGGCCATGAAAACATCACAGCCCTTCTTCACTTCTTCAAAGACCTAGGCTTGGACATACTTGACTTGGTCTCTCTCTCTGGTTCACACACTATAGGAAGAAGCACATGCAAATCCTTCATGAATAGGGTTTATAACTTCAATGGCACTGCAAAACCTGATCCTTCATTGAACATATATTACCTGAAAATGCTCAAGAGAAGATGCAAAAGAGAGATGGATTTGGTTCACTTGGATGTGATAAGTCCAAGGACTTTTGACAATGTTTATTACACAAATCTTGTGAGGAAGGTGGGTTTGCTGTCTACAGATCAGTTATTGTATTCAGATTCAAGAACTGGTCCTTTTGTGCATGCATTTGCAACTCAACCTTTTCTTTTCAGTAGCCAGTTTGCAGCTTCCATGGTGAAGCTTGGGAATGTTCATGTTTTGAGCAGGCCACATGAAGGTGAAATCAGAACCAACTGCAACTATGTCAATCCTGTTTGA 1446 0.4419 MSLFQTLLNQSDLFEPFRVFLNENSETQMDWRETREAHIFEMDLPGLTKEDVKLEVHENRVLCIRAERKGGGGGDNDESKEEEKSLRWHCKERETIRTISRKFRLPENAKVEAIKASMSDGVLKITVPKDETKKKHKQQQKKATTTKNMKLFHVSVILVLVITCCLEAEANVRKKSANSLLPPEELLSSGHYHRTCPDAEAIINQKVVTWVKKDPTLAPSIIRLHFHDCAVRGCDASILLNHANGERAAYESRTLRGFQVIDDIKAEVERRCPKTVSCADILTAAARDATILAGGPFWEVPFGRRDGRISIAKEASFVPQGHENITALLHFFKDLGLDILDLVSLSGSHTIGRSTCKSFMNRVYNFNGTAKPDPSLNIYYLKMLKRRCKREMDLVHLDVISPRTFDNVYYTNLVRKVGLLSTDQLLYSDSRTGPFVHAFATQPFLFSSQFAASMVKLGNVHVLSRPHEGEIRTNCNYVNPV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0889 481 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 144 IPR002068 -
Lele12g0889 481 CDD ACD_ScHsp26_like 28 129 - -
Lele12g0889 481 ProSitePatterns Peroxidases proximal heme-ligand signature. 341 351 IPR019793 -
Lele12g0889 481 FunFam Peroxidase 319 457 - -
Lele12g0889 481 Gene3D Peroxidase, domain 2 319 457 - -
Lele12g0889 481 PRINTS Haem peroxidase superfamily signature 218 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Haem peroxidase superfamily signature 294 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Haem peroxidase superfamily signature 398 413 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Haem peroxidase superfamily signature 341 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Haem peroxidase superfamily signature 276 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 Gene3D - 190 479 - -
Lele12g0889 481 MobiDBLite consensus disorder prediction 67 86 - -
Lele12g0889 481 SUPERFAMILY HSP20-like chaperones 15 137 IPR008978 -
Lele12g0889 481 FunFam Peroxidase 190 328 - -
Lele12g0889 481 Pfam Peroxidase 204 441 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PANTHER - 154 479 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 Pfam Hsp20/alpha crystallin family 30 138 IPR002068 -
Lele12g0889 481 ProSitePatterns Peroxidases active site signature. 218 229 IPR019794 GO:0004601
Lele12g0889 481 PRINTS Plant peroxidase signature 275 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 340 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 412 429 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 396 411 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 452 465 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 256 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 196 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 294 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 PRINTS Plant peroxidase signature 220 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 Gene3D - 2 140 IPR008978 -
Lele12g0889 481 ProSiteProfiles Plant heme peroxidase family profile. 186 479 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0889 481 CDD secretory_peroxidase 187 478 IPR033905 GO:0004601|GO:0042744
Lele12g0889 481 SUPERFAMILY Heme-dependent peroxidases 187 480 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0889 Lele-ChrLele12 16801562 16804404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0889 179 479 Peroxidase AT1G30870 50.495 7.28e-106 317