Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0870 ATGAGAAGTGGCTTTCTTCTCCTCTATCTGGCTCTAGTGATTATTTCTCTCACTCAATGTGATGCAGAGAGATCGATGAGAGTATCATCAAAAGGTGCAAAACATGGGAGAATTCTGACACAAAAGCACGCGAAGAAGTTGAGAATAATGGCTTTGAAGCATTTTGATTTTTCTTCTTTAGAATTTTCAAATGCACAAAGTGTTGACTCATCATCTCCTTTGCCACCTTATGAATCTCTAGCTCCTTTTCCTTTACCACAAAATAGCCCACCGACGGGCCTTCAGTTACCACCACCAGGCACAACTGGGTCTCTTCCCACACCTACCCCACAAAGTATCCCAAACTCCCCTGGCATGAGTTCACCATTTCAAAATCCTCCAATTATTATCCCGGGCTCACCGGGGTCTATGACAAGTCCGCCGAGTCCTATCTCGTCCCCAAGTGGAGGAACTATGCCGGGCTCACCTGTACCGATGCAAAACCCTCCAATCGTTCTCCCTAGTCCATCCGGATCTTCAAGTCCACCAAGTACTATCCCATCCCCAAGTGGAGGTACTGGGCCAGGCTCACCTGTACCGATGCAAAACCCTCCAATCGTTCTCCCTAGTCCATCCGGATCTTCAAGTCCACCAAGTACTATCCCATCCCCAAGTGGAGGTACTGGGCCAGGCTCACCTGAACCGATACAAAATCCACCAGGGTCTACAATGAACCCACCAAGTACAATTTCTCCTCCAAGTGAAGGTACTGTTCCAGGTTCCCCGGAACCAATACAAAATCCTCCTATTATTCTTCCAGGCCCACCCGGGTCAACCCCAATCCCACCAAATACAAACCCATCTCCTGCTGGTGGTGGTGGTGGTGTTCCTAGCCCAATTGTGTTTGAACCTCCTGTAGTGTATCCGCCACCTTCAGTGCCTCCTCCTCCTAGCCGCATGGCCCCAAGTGGAGCCTTATGGTGTGTGGTTAAGCCATCAGTGCCAGACCCAATAATGCAAGATGCTATGAACTATGCTTGTGGGTTAGGTGCAGATTGCGATCCCATTCGACCCAATGGGCCTTGCTTCGAGCCCGATACTGTTATTTCACATACTTCATTCGTCTTCAATAGTTTCTGGCAAAATTCCAAGGCCACTGGTAGCAACTGCGACTTTGGAGGCACTGGCATGCTTGTTTCAGAGGACCCAAGCTACGATGGATGTCACTTTGTCTACAGTTAG 1221 0.4898 MRSGFLLLYLALVIISLTQCDAERSMRVSSKGAKHGRILTQKHAKKLRIMALKHFDFSSLEFSNAQSVDSSSPLPPYESLAPFPLPQNSPPTGLQLPPPGTTGSLPTPTPQSIPNSPGMSSPFQNPPIIIPGSPGSMTSPPSPISSPSGGTMPGSPVPMQNPPIVLPSPSGSSSPPSTIPSPSGGTGPGSPVPMQNPPIVLPSPSGSSSPPSTIPSPSGGTGPGSPEPIQNPPGSTMNPPSTISPPSEGTVPGSPEPIQNPPIILPGPPGSTPIPPNTNPSPAGGGGGVPSPIVFEPPVVYPPPSVPPPPSRMAPSGALWCVVKPSVPDPIMQDAMNYACGLGADCDPIRPNGPCFEPDTVISHTSFVFNSFWQNSKATGSNCDFGGTGMLVSEDPSYDGCHFVYS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0870 406 MobiDBLite consensus disorder prediction 191 211 - -
Lele12g0870 406 PANTHER BETA-1,3 GLUCANASE 315 403 IPR044788 -
Lele12g0870 406 SMART X8_cls 319 403 IPR012946 -
Lele12g0870 406 MobiDBLite consensus disorder prediction 127 141 - -
Lele12g0870 406 FunFam Glucan endo-1,3-beta-glucosidase 4 314 406 - -
Lele12g0870 406 MobiDBLite consensus disorder prediction 77 115 - -
Lele12g0870 406 Gene3D - 313 404 - -
Lele12g0870 406 MobiDBLite consensus disorder prediction 66 291 - -
Lele12g0870 406 MobiDBLite consensus disorder prediction 250 280 - -
Lele12g0870 406 Pfam X8 domain 319 390 IPR012946 -
Lele12g0870 406 MobiDBLite consensus disorder prediction 156 176 - -
Lele12g0870 406 MobiDBLite consensus disorder prediction 226 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0870 Lele-ChrLele12 16568270 16570359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0870 320 404 Glycoside Hydrolase AT5G56590 46.512 1.85e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0870 12 16568270 16570359 Lele12g0870 12 16568270 16570359 ECH
Lele09g0445 09 3302801 3305764 Lele12g0870 12 16568270 16570359 hybridization
Lele10g0410 10 2884337 2886496 Lele12g0870 12 16568270 16570359 hybridization