Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0869 ATGATCATAAGCTTTCAACCTTCTTCTTCCTCCTCCTCCTTCTTCAAATCTCTCTGCGTTTACACGTTCCTCATCATCATCATCATCTTTCCCAGTACTACTGTGGCTTCTTCTTCTGGGGATGGCTGTTCCTGTGACCTCTCAAAAGCTAAGAACAGTGACGATGCAAGTGAAGCTCTGAGATACAAACTCGGCTCCATAGCTTCTGTTCTCATCGCCGGGGGTCTCGGCGTGAGCCTTCCATTGCTGAGCAAGAGTATCCCAGCTCTGAGACCTGAAAATAACATGTTCTTCATGGTGAAAGCTTTCGCCGCCGGAGTGATCCTAGCAACTGGGTTCGTTCACATACTTCCTGAAGCATTCCAGAGACTGAACTCGCCATGTTTAACAGACAAACCTTGGCACAAGTTTCCCTTCTCTGGCTTCGTCGCCATGGTTTCTTCTATAGGAACATTAATGGTGGATTCTCTTGCAACTGGGTATTATAAAAGACAACATTTCGGCTCAAAACAATTTCCTTCTACAGACGAAGAGAAAGGAGACGACGACGAACATGCTGATCATATTCATGTTCACACTCATACGACGCACGGTCATGCTCACGGATCAGCACAAGAGGACTCAGAGTTAATCAGGCAGAGAATCATATCACAAGTGTTGGAGATGGGAATAGTTGTGCATTCAGTGATAATTGGAATCTCTTTGGGTGCTGCTGGCAGCGTTGATGCTATAAAGACTCTTCTTGTGGCCCTCTCTTTCCATCAGTTCTTTGAAGGCATGGGCCTTGGTGGTTGTATTTCTCAGGCCAAGTTCAAGTCAAGAGCAAGAGCAATAATGGCAACATTTTTCTCACTGACAACACCGATAGGGATAGCAATAGGGATGGGAATTTCAAGTGTGTATGAAGAGAACAGCCAAACTTCAGTGATAGTTGAAGGCATTTTCAATTCTGCTTCAGCTGGAATCTTAATCTACATGGCTCTTGTTGATCTTCTTGCTGCTGATTTCATGAACCCTAAGCTTCACAGCAATGTCAAGCTCCATCTTGGAGCTAACATCTCTCTCCTTCTTGGCTCTGCTTCCATGTCTCTCTTAGCTAAATGGGCTTGA 1110 0.4505 MIISFQPSSSSSSFFKSLCVYTFLIIIIIFPSTTVASSSGDGCSCDLSKAKNSDDASEALRYKLGSIASVLIAGGLGVSLPLLSKSIPALRPENNMFFMVKAFAAGVILATGFVHILPEAFQRLNSPCLTDKPWHKFPFSGFVAMVSSIGTLMVDSLATGYYKRQHFGSKQFPSTDEEKGDDDEHADHIHVHTHTTHGHAHGSAQEDSELIRQRIISQVLEMGIVVHSVIIGISLGAAGSVDAIKTLLVALSFHQFFEGMGLGGCISQAKFKSRARAIMATFFSLTTPIGIAIGMGISSVYEENSQTSVIVEGIFNSASAGILIYMALVDLLAADFMNPKLHSNVKLHLGANISLLLGSASMSLLAKWA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0869 369 Pfam ZIP Zinc transporter 62 366 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele12g0869 369 PANTHER ZINC/IRON TRANSPORTER 59 363 - -
Lele12g0869 369 TIGRFAM zip: ZIP zinc/iron transport family 45 369 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0869 Lele-ChrLele12 16562598 16565555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0869 10 369 Inorganic Solute Cotransporters AT3G12750 60.221 6.19e-152 431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0869 12 16562598 16565555 Lele12g0869 12 16562598 16565555 ECH
Lele09g0446 09 3306395 3309145 Lele12g0869 12 16562598 16565555 hybridization
Lele10g0411 10 2890981 2893925 Lele12g0869 12 16562598 16565555 hybridization