Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0861 ATGAAAGTGGTTGTGGGAGGCGTCTTCAGGCACCTCAAATCTGCAATGGAAGATGTGAACATCTGGTTATCCTTCTCCATGAATGATAATCTAAACCATGATTTAGCCATTCGAAGGTTCTGTCCTGAAAGAATAGAGCAAGAACAAGGAGATCAGAGCCAAGATCATCATCATCAAGAAGCACCACCAACAAAAGCACCTGATGAAACTGAACTGTCTTCTTCTGATGCTGCCACCACAAGCACTCCATGTCTGGCTTCTTCAGATGTCGATGAATTTGTTGATAGCTTCATCAACATGGACCAGCATGACGATAATGAGTATGCCAATGAAGAAAAAGATCAAGAACCTCAAGAGAACAAACACCATCATCATCAAGCTTATGATCACTTCATGTTGATGAATGATGAAGACGAGGTTGATCCATTCTATATGATGAATGAAGAAGCTTATGGGTATGTTCCAATCACAATGCAGGAAGAAGAAATGGAGATGAAGGGCTTCTCTGGTGCAGAAGAAATGAGCCTTGGTATGGACAAAGGGCTAGATTTGGTTCATATGCTATTGGCTTGTGCTGAGGCTGTTAGTTGCAGAGACAATCGTCAAGCAGACTTGCTTCTCAGAAAGATTTGGGATTTCGCTAGTCCCTGGGGTGACTCATTACAGAGAGTTGCCTATTGTTTTGCTGAAGGCTTGAAGTGTAGATTGTCTCTTCTTCCTCACAATGTGTCTGCAAATAGTACAGTAAAAAACAGTACTACTACTACTACTAGAAATTCTTCTTCTGTAACTAGGGAGATGAAGTTGGAAGCTTTTCATCTCCTTTACCAAACTACACCATATATTGCTTTTGGTTACATGGCCGCAAATGAAGCTATATGCCAAGCATCACAAGGGAAAAACTCTTTACATATAATTGATCTTGGAATGGAACATACCCTTCAATGGTCTTCCTTGATAAGGGCTCTTGCCTCGAGGCCTGAGGGCTCTCCAAGGCTCCAGATCACAGGGATAATGAACTATGATGATGATGAACTGAAACTTCAATCAAGCGTGAGATTGCTGGTGGAGGAAGCAAGCTCATTTGGGATAGCAATGGAGTTTCACATGATATCAGAGCCTGCAACACCTTCTCTTATAACTAAGGAGAAGCTGAACTTGAGAGAAGGAGAAGCCTTGTTTGTTAATTGCATCCTGCACTTGCACAAGTATGTTAAAGAAAGTAGGGCCTATCTCAAGGCAATTCTACAATCAATCAAGAAGTTAGGTCCTACTGTACTTACTGTGGTAGAGCAAGATTCAAACCACAATGGACCTTTCTTTCTAGGGAGGTTTCTAGAATCATTACACTATTACTCTGCCATTTTTGACTCACTCGAGGCGACTATGCCGAGAAATAGCCAGCCGAGGATGAAAATTGAAAGACTGTGTTTTGCAGAAGAGATTAGAAATATTGTAGCTTATGAAGGCCCTAATAGGATGGAAAGGCATGAGAGTGTCGATCGATGGCGAAGGCAATTGGGACGGGCAGGGTTTCAAGTGATGGCATTGAAGCGCACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCCAGTGATAAAGGTTGCCTTCTGCTTGGGTGGAGAGGAAGGTCAATAATGATGGCATCCGCTTGGCAAGTAGCAACTTTGTAA 1695 0.4206 MKVVVGGVFRHLKSAMEDVNIWLSFSMNDNLNHDLAIRRFCPERIEQEQGDQSQDHHHQEAPPTKAPDETELSSSDAATTSTPCLASSDVDEFVDSFINMDQHDDNEYANEEKDQEPQENKHHHHQAYDHFMLMNDEDEVDPFYMMNEEAYGYVPITMQEEEMEMKGFSGAEEMSLGMDKGLDLVHMLLACAEAVSCRDNRQADLLLRKIWDFASPWGDSLQRVAYCFAEGLKCRLSLLPHNVSANSTVKNSTTTTTRNSSSVTREMKLEAFHLLYQTTPYIAFGYMAANEAICQASQGKNSLHIIDLGMEHTLQWSSLIRALASRPEGSPRLQITGIMNYDDDELKLQSSVRLLVEEASSFGIAMEFHMISEPATPSLITKEKLNLREGEALFVNCILHLHKYVKESRAYLKAILQSIKKLGPTVLTVVEQDSNHNGPFFLGRFLESLHYYSAIFDSLEATMPRNSQPRMKIERLCFAEEIRNIVAYEGPNRMERHESVDRWRRQLGRAGFQVMALKRTSQARMMLSVYDCDGYTLSSDKGCLLLGWRGRSIMMASAWQVATL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0861 564 MobiDBLite consensus disorder prediction 47 65 - -
Lele12g0861 564 ProSiteProfiles GRAS family profile. 175 560 IPR005202 -
Lele12g0861 564 MobiDBLite consensus disorder prediction 47 85 - -
Lele12g0861 564 MobiDBLite consensus disorder prediction 68 85 - -
Lele12g0861 564 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 559 IPR005202 -
Lele12g0861 564 Pfam GRAS domain family 184 560 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0861 Lele-ChrLele12 16500229 16502345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0861 179 561 GRAS Transcription Factor Family AT1G66350 37.371 3.37e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g0861 GRAS 4.7e-111 CL0063