Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0860 ATGATGGAACAACCTGGAATGCAGAAACAGCAACAGTACAATATCATGGAACCTAGAAATGAGGAAATCCATTCTGCACCACAGTCTACCGTGCAGGACCGTCTAGAAGGCATGCGTATCAATATGAGGCCTGCAGACCTTAATATGTCAGATAAAAAACCTGTACTTAATTACTCCATTCAAACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATAATAGGTGATCCCAATTATGCAACGGGTTATATGGAATTGGAGGGTATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGCTCAGATATTTCTATGCTCCCAAAAGTTGAAAAAGGTCGCAAAGAATATGACAGAAGGAGCTCTTCTTTGCAACGGGACAGAAGCAATTATGGGTCAGTTCGATCAATCCCTAGAACTTCATCTAATCAAGAAAATAACCGAGTCCTTAATAGTATTGCTTCTTCTGGAGCTTCTACTGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATACTGCCACGCCCCAGAGATGGAAAGCTTAGATATGTTGGAGGTGAAACGCGTATTATTTCTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATAATGAAACTCATGCTATAAAGTATCAACTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTGGTGACGAGGATCTGCGAAATATGATGGAGGAATGTCATGATCTAGAAAACAGAGAAGGATCACAAAAACTTAGGATGTTTTTGTTTTCCGTTATTGATATGGATGATCCTAGTGTTGATGGTGATACTGAAATCCAGTATGTAGTGGCAGTTAATGGCATGGACTTGGGGTCAAGGAACCGTTCAATCCTTCATGTTACAAGCGCTTCTGCTGATAATTTACATGAACTAGATGGGCAGAATGTTGAGAGGGAGGCCGGTAGAACTCAGATAGAATCAACTGGAGCCCCTAGTTCTTCCTTGACTGCCAATGGTAACTCATCATGGGGAATTCAGTCTTCGCAATCAATGATTCCAACTGCCTCAAGTGCTTATGAAAGCAATCTGTTGTTTCATAGTAGCCATCATGGGGAAACCAGTCAATTTCCAGTGCACTATGGTGTTGATTCTTTGAACAACTCAGGTTTTAGACCGATTCCAGTTTCTGTGCCTCCACATGTTCCTAACGTTCAAGGAAATATCAATGAAGGGCATCCATCTGATGTGTTGCAGGTACAAAATCCAGAAATTCCAGCAAAGCAGGTAAAGAAAAGGGGTGATAGTTCCATTGAGCATGAAAGTGACTCTGGAAAAGCCTTATCCTCAGAAACACCATATCCTGTTCCTCCACAACTATTTGATGGAAATTTACCGGGTAACTTTTCTGAAGTATCAGTTACTAATGCTGTACCAGGGATGCACCTGCCTAAAGTTCCTTCAAAAAGCAAGGTCAAGCACCAACATTATGAGGAGGCCTCTTCATTGGCTAATGCGGTGAATTCCACACAGATTCCGAAGTCTGGTGAAGATGACTTCTATTCCACCTCTACTAATGCTTTCAGTCCTTCTTATGTTGATGCTGGATCCAATGTTATTGATTTGAGTTGCCTTGAGCCACCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATGCACATGGTTCTCAGGTTCTCATGTCTGATTTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAAACAAGTGATAATTTTCAGGTTGAAAATCTGTCAAATTGGAATGCAGTGTCAAGCACGACAGCAAAACCATTGAATACAAATGTCCCTGCCATTGGCAATGGGCTTGCCAAGCTACAAAATCATAAAAAGTTGCCAGATAACAACACTGATAATAAAGTTGCTGCAAATGAGGATTGGATCCTTAGATCTGAAAGTGAAACCAATTTATCCAAAGATAACCATAACCATCGCCCAGTTGATGAAACCAACAGCACTAAACATCCTGCATTTCACAAGGTTCCATCTGACCGTAATTTCGGTGATGCTTCTAGCAAAGAGTCCAGTAATGATGCTAAGGTTCAACCACAGCCCGTTTCTTTAACTGCGAACGTGAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCACGCCTGCTCAAGGTGATATTATGATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCACCAAGGCAATAATCTCTGAAGATTCCTCACGTATTAGTCCATTGCCAACAGATGGAACAGGCTTGAGCTTAAATGTGGAAAATCATGAGCCAAAACATTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTCTGATAATTTGTCTCTAATTGATCAAGATCATCTAGGTTTTTCATCTACCTTAAGAAAAGCAAAAGAAGGAGATAGTAGATCTCAGCAAGTTGCACCCCTGTTAGCTGATGGAGTTTCAGTAGGTCGTGATTTTGGTAAGGAAAATCAGAAAAATTTGCCTGTAACAACTAGAACAGAGGCCACTGTTCCGCAAACAAACTATGATCAAACCCAAGTTATTGAGACTGAAAACAAGAATTTGGATCCAGTAAAGGGAAACACAATAGTAAAAGACTCTGGATATGAGGATGGCAAGAATGAAGCAGGGAATATTGGTCATCTGCATGATCGTTCTGTGGATGATATTGACATCAGTACTTTGCAGCTCATAAATGATGAAGATCTTGAAGAGTTGAAAGAATTGGGTTCAGGAACCTTTGGGACTGTATACCATGGAAAATGGAGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTAGATCCTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGACGGGCCCGGAGGAACATTAGCTACTGTTACAGAGTTCATGGTAGATGGTTCTCTAAGGCATGTTTTGCTTCGTAAGGATAGGTATTTAGATCGCCGCAAGAGGCTGATAATCTCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTTGTGAACTTAAAGGATTCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCACCTGAGCTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGATGTGTTCTCGTTTGGCATCGTATTGTGGGAGATTCTTACTGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCAAGTTATTGTGATGCTGAGTGGCGGAAACTAATGGAGCAGTGTTGGGCACCTAACCCTGCAGCCAGGCCATCATTCACAGAAATTGCCCGCCGCTTAAGGGTGATGTCAGCAGCTGCTAGTCAGACCAAAGGGCAAGGCTATAAGGCATCCAAATGA 3687 0.4158 MMEQPGMQKQQQYNIMEPRNEEIHSAPQSTVQDRLEGMRINMRPADLNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIIGDPNYATGYMELEGILGISHSGSESGSDISMLPKVEKGRKEYDRRSSSLQRDRSNYGSVRSIPRTSSNQENNRVLNSIASSGASTGSSMKMKVLCSFGGKILPRPRDGKLRYVGGETRIISIRKDISWQELMQKALSLYNETHAIKYQLPGEDLDALVSVSGDEDLRNMMEECHDLENREGSQKLRMFLFSVIDMDDPSVDGDTEIQYVVAVNGMDLGSRNRSILHVTSASADNLHELDGQNVEREAGRTQIESTGAPSSSLTANGNSSWGIQSSQSMIPTASSAYESNLLFHSSHHGETSQFPVHYGVDSLNNSGFRPIPVSVPPHVPNVQGNINEGHPSDVLQVQNPEIPAKQVKKRGDSSIEHESDSGKALSSETPYPVPPQLFDGNLPGNFSEVSVTNAVPGMHLPKVPSKSKVKHQHYEEASSLANAVNSTQIPKSGEDDFYSTSTNAFSPSYVDAGSNVIDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDAHGSQVLMSDLLSDFNQQNSTTETSDNFQVENLSNWNAVSSTTAKPLNTNVPAIGNGLAKLQNHKKLPDNNTDNKVAANEDWILRSESETNLSKDNHNHRPVDETNSTKHPAFHKVPSDRNFGDASSKESSNDAKVQPQPVSLTANVSQDVSQGLPSDAVSTPAQGDIMIDIEDRFPRDFLYDMFTKAIISEDSSRISPLPTDGTGLSLNVENHEPKHWSYFQKLANEGSDNLSLIDQDHLGFSSTLRKAKEGDSRSQQVAPLLADGVSVGRDFGKENQKNLPVTTRTEATVPQTNYDQTQVIETENKNLDPVKGNTIVKDSGYEDGKNEAGNIGHLHDRSVDDIDISTLQLINDEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIISMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDSLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDAEWRKLMEQCWAPNPAARPSFTEIARRLRVMSAAASQTKGQGYKASK 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0860 1228 Gene3D Transferase(Phosphotransferase) domain 1 1034 1227 - -
Lele12g0860 1228 Pfam PB1 domain 192 277 IPR000270 GO:0005515
Lele12g0860 1228 CDD STKc_MAP3K-like 952 1209 - -
Lele12g0860 1228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1071 1083 IPR008271 GO:0004672|GO:0006468
Lele12g0860 1228 MobiDBLite consensus disorder prediction 711 728 - -
Lele12g0860 1228 Gene3D Phosphorylase Kinase; domain 1 939 1033 - -
Lele12g0860 1228 ProSiteProfiles Protein kinase domain profile. 946 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0860 1228 ProSitePatterns Protein kinases ATP-binding region signature. 952 977 IPR017441 GO:0005524
Lele12g0860 1228 SMART PB1_new 191 278 IPR000270 GO:0005515
Lele12g0860 1228 MobiDBLite consensus disorder prediction 677 705 - -
Lele12g0860 1228 Gene3D - 195 277 - -
Lele12g0860 1228 SMART serkin_6 946 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0860 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1034 1226 - -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 440 458 - -
Lele12g0860 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Lele12g0860 1228 SUPERFAMILY Protein kinase-like (PK-like) 939 1208 IPR011009 -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 333 353 - -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 440 466 - -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 119 136 - -
Lele12g0860 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 939 1033 - -
Lele12g0860 1228 PRINTS Tyrosine kinase catalytic domain signature 1136 1158 IPR001245 GO:0004672|GO:0006468
Lele12g0860 1228 PRINTS Tyrosine kinase catalytic domain signature 1180 1202 IPR001245 GO:0004672|GO:0006468
Lele12g0860 1228 PRINTS Tyrosine kinase catalytic domain signature 1065 1083 IPR001245 GO:0004672|GO:0006468
Lele12g0860 1228 PRINTS Tyrosine kinase catalytic domain signature 1028 1041 IPR001245 GO:0004672|GO:0006468
Lele12g0860 1228 MobiDBLite consensus disorder prediction 677 728 - -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 108 159 - -
Lele12g0860 1228 CDD PB1_UP2 180 276 - -
Lele12g0860 1228 SUPERFAMILY CAD & PB1 domains 193 277 - -
Lele12g0860 1228 Pfam Protein tyrosine and serine/threonine kinase 947 1209 IPR001245 GO:0004672|GO:0006468
Lele12g0860 1228 PANTHER SERINE-THREONINE PROTEIN KINASE 221 1210 - -
Lele12g0860 1228 MobiDBLite consensus disorder prediction 137 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0860 Lele-ChrLele12 16493444 16499290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0860 25 1228 MAP Kinase Kinase Kinase AT1G16270 47.286 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele12g0860 PK_Tyr_Ser-Thr 1.5e-62 CL0016