Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0858 ATGGACCCTAGATATGATGGCTTCCAGCCTGTGCTACAGTCTGTAATGCAGGACCATCTGGATGGCGTGCATACTAGTAGGGGATCATATGCCCCTAATACATCTGAAGTTAGACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTTCACTTGAATTTATGCGTGATAGGGTGAATCTTAGGAAGCCTGTAATTCCCAATGTTGGTGATCCCAATTCTGCAGCAGGTCATAGTAGAAGTGCAGGATGTGAAAATGGATCAGATATTTCTCTGTGTGAAATGGCTGGCAGGGATCCAAAAGAGTATGATGGAAAGGATACATTGTTAGATGGAGGCAGATGCAATTATGCATCAATTCAATCAATTCCAAGAGCTTCATATAATCAGGAAAATGGTCGATCTTTGCATGGGTATGCTTCTTGTGGAAGTTCTCATAGCTTATCAATGACAATGAAAGTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGGAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGAAAGGACATATCTTGGCAGGAGTTTATGCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGATGAAGATCTGCAGAATATGATGGAGGAATGTAATCACCCACAAGATAGAGAAGGATCACAAAAGCTTAGAATTTTTTTATTCTCAATGAGTGATTTGGATGATGCTCATTTTGGTCTCAGTAGTGTGGGTGATGATTCTGAGGTCCAGTTTGTTGTTGCTGTTAATGGCATGGACTTTGGTTCAAGAGACAACTCAGTGCTTCTTGGTGCGAGCGCTTCAGCAAATGATATACATGAATTGGACTGGCAAAATGCTGAGACGGAAGTTGGGAAAGTTCCTGTAGAATCTATTTGTATCAGCAACGCTCCATTGATTGGGAATTATGACTCATCATCGACCATTCAGTCTTCAAAACCAATGCTTCCAACTTCCTCAAATGCTTATGAAACCTATCCACTCTTCAGAGACCAGATGATGCACCTTGGGGAGGCTTTTAGTCAATATCCTATTCACCATGGCCTTAATCCTTCTCAAAACTTTACTCTCGTAGAGACTTCTAATGCTATGCCTCCTCATGGGATGATAAATCAACAAGGGATTTTGAATGAAGGTTCTTCTCCTAATGGATTACAAGTGCAAAATTTGGAAATACCAACAATGCTTGTGAAAAAACTGGGTGATATTTCAGTTCCACAAGGAAGTAACCCTGTAAAAGTTCTATCCTCGGAAACACCATCCCGTGTTCCCACACAACCAAAAGATGATTTCTTGAAAAATAATGATAATAAAGCTACGGTTGCAGTTAACATACCTGAGGAGAAACTACACACACTGCCATCAATGAAAATGGGACAGCAACAGGAGTATAAAGAGGCCTCTCCTACATCTAGCAGCGCATTTGGTCCTGGTAATGTTGATTTTCAATCCAATGGGATTGATTTAAGTTGCTTTCACCCTCCTCCAATGCCTAAAAGAGTTTACTATTCTTATTCAGAAAGAACTCCTAGGGAGCAAGTAGAATTGCTGAATCGCTCTGCAAAGTCAGATGACACATATGATTCTCAGTTTCCCGTATCAGATTTACTTTTTGACATCAATCCTCAATATTTGGTCACAGAATCTGGTGACGACTTGCACAATAGAAATCAGTCTAATTTAACAGAGGATTCAAGTGGCACATCAAAACCACTGTGTGTGGATGGCAACATCATTGTTAATGGGCTTAATGAATTACAGATGCACAAACTGTTGCCTGAGACGAGCAATCGGATGAAGTCAAAACTCTCAGACCATGTGGATGTGGAGTTGAAGCCGGTATTACCAAACAATGAAGGAAGTAAAGTGGTGGTAAATGAGGATCAGGTCATCAGGTCCGATACTGATAGTTATTTTGAAGATAACTGCAGCAAACCCCTGGGTGATGAAAACAAAAACCTTAAATCAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTTAAGCGCAATGATGGCCCAACATCTTATCTTCCAGAGATTAATTGGGGTCATGGCTCAGGGAAAGAATCAAATAATGATTGTAATGTTCAAGAAGTACCCGTTTCTTTGACTGATAACACAACTGAAAACATTTCTCAAGATTTTACATTAAATGCTCTTCCCAAACAAGAACAGGCTGATATTCTTATTGATATTGATGATCGATTTCCTCGTGAACTGCTCTCTGATATGTATACTAAAGCAATACTTGCGGAAGACCCATCCACTTTACATCCATTAACTAATATTGGAGTGGGCATAAGCATAAACATGGAAAACCATGAACCCAAGTCATGGTCATATTTTGGGAAATTGGCACAAGAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCTGGAAATGTAGATGATAGAACTCACCTTGTCACGCCGCTAACACCTGATGAAATATCTGTAAACCAAGCAGATTTGCATCTCAATTTTGATGGAGAAAGTCAGAAGGGTTTTCATGGAATAATTGGAACAGAAACCACTTTTGTGCAGTCTAATTATGATCATTCCCAAGTGAAGGAGACCAAAAGTATGCAGTTTGATGGTACAGTGGAGAATTCAAGGGGTCAAGAATCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAATAGTGGTCTACCTCCACTTGATCCTTCTCTGGAAGGTTTTGATATCAATTCCTTACAGGTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCGAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGCAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGGATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGGAATACGTTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACCAAGTCTCTGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACATTAAGGCCAACAATACCAAGTTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCATTCACAGAAATTGCTAGTCGCTTAAGGGTTGTGTCTGCTTCTGCTTCCCAAACCAAGTCACAGCCTAACAAGCCAGCCAAATGA 3681 0.4089 MDPRYDGFQPVLQSVMQDHLDGVHTSRGSYAPNTSEVRPVLNYSIQTGEEFSLEFMRDRVNLRKPVIPNVGDPNSAAGHSRSAGCENGSDISLCEMAGRDPKEYDGKDTLLDGGRCNYASIQSIPRASYNQENGRSLHGYASCGSSHSLSMTMKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRKDISWQEFMQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHPQDREGSQKLRIFLFSMSDLDDAHFGLSSVGDDSEVQFVVAVNGMDFGSRDNSVLLGASASANDIHELDWQNAETEVGKVPVESICISNAPLIGNYDSSSTIQSSKPMLPTSSNAYETYPLFRDQMMHLGEAFSQYPIHHGLNPSQNFTLVETSNAMPPHGMINQQGILNEGSSPNGLQVQNLEIPTMLVKKLGDISVPQGSNPVKVLSSETPSRVPTQPKDDFLKNNDNKATVAVNIPEEKLHTLPSMKMGQQQEYKEASPTSSSAFGPGNVDFQSNGIDLSCFHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQFPVSDLLFDINPQYLVTESGDDLHNRNQSNLTEDSSGTSKPLCVDGNIIVNGLNELQMHKLLPETSNRMKSKLSDHVDVELKPVLPNNEGSKVVVNEDQVIRSDTDSYFEDNCSKPLGDENKNLKSDFPALDQVPTFKRNDGPTSYLPEINWGHGSGKESNNDCNVQEVPVSLTDNTTENISQDFTLNALPKQEQADILIDIDDRFPRELLSDMYTKAILAEDPSTLHPLTNIGVGISINMENHEPKSWSYFGKLAQEGLDNISLIDRDPGNVDDRTHLVTPLTPDEISVNQADLHLNFDGESQKGFHGIIGTETTFVQSNYDHSQVKETKSMQFDGTVENSRGQESEFEDGKFETRNSGLPPLDPSLEGFDINSLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGATMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNQVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVVSASASQTKSQPNKPAK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0858 1226 ProSitePatterns Protein kinases ATP-binding region signature. 950 975 IPR017441 GO:0005524
Lele12g0858 1226 SMART PB1_new 167 254 IPR000270 GO:0005515
Lele12g0858 1226 MobiDBLite consensus disorder prediction 438 464 - -
Lele12g0858 1226 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Lele12g0858 1226 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1032 1224 - -
Lele12g0858 1226 MobiDBLite consensus disorder prediction 485 509 - -
Lele12g0858 1226 Gene3D Transferase(Phosphotransferase) domain 1 1032 1226 - -
Lele12g0858 1226 Pfam Protein tyrosine and serine/threonine kinase 945 1207 IPR001245 GO:0004672|GO:0006468
Lele12g0858 1226 MobiDBLite consensus disorder prediction 579 598 - -
Lele12g0858 1226 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 937 1031 - -
Lele12g0858 1226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1069 1081 IPR008271 GO:0004672|GO:0006468
Lele12g0858 1226 CDD STKc_MAP3K-like 950 1207 - -
Lele12g0858 1226 Gene3D Phosphorylase Kinase; domain 1 937 1031 - -
Lele12g0858 1226 SMART serkin_6 944 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0858 1226 ProSiteProfiles Protein kinase domain profile. 944 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0858 1226 MobiDBLite consensus disorder prediction 439 458 - -
Lele12g0858 1226 SUPERFAMILY CAD & PB1 domains 169 257 - -
Lele12g0858 1226 MobiDBLite consensus disorder prediction 477 509 - -
Lele12g0858 1226 PANTHER SERINE-THREONINE PROTEIN KINASE 197 1208 - -
Lele12g0858 1226 PRINTS Tyrosine kinase catalytic domain signature 1134 1156 IPR001245 GO:0004672|GO:0006468
Lele12g0858 1226 PRINTS Tyrosine kinase catalytic domain signature 1063 1081 IPR001245 GO:0004672|GO:0006468
Lele12g0858 1226 PRINTS Tyrosine kinase catalytic domain signature 1026 1039 IPR001245 GO:0004672|GO:0006468
Lele12g0858 1226 PRINTS Tyrosine kinase catalytic domain signature 1178 1200 IPR001245 GO:0004672|GO:0006468
Lele12g0858 1226 MobiDBLite consensus disorder prediction 897 926 - -
Lele12g0858 1226 SUPERFAMILY Protein kinase-like (PK-like) 934 1206 IPR011009 -
Lele12g0858 1226 CDD PB1_UP2 156 252 - -
Lele12g0858 1226 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 254 - -
Lele12g0858 1226 Gene3D - 171 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0858 Lele-ChrLele12 16482269 16489116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0858 21 655 MAP Kinase Kinase Kinase AT1G16270 37.553 7.01e-93 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele12g0858 PK_Tyr_Ser-Thr 4.1e-62 CL0016