Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0855 ATGGATTGGTTTGGTCTTGATATAAGTGTTGTTACCACCAGGGTATGGAGACATGTTGTCCAGAAAGGGGATACAGTTGTTGATGCCACTTGTGGTAATGGTTATGACACCTTAGCATTGCTCAATTTGGTTGCTGATGATTCGCATAAGGGTTTCGTTTATGCATTGGACATTCAGAAAGATGCTTTGGATAACATCTGCCATAGTAAAATGGAGGAAGTTATTCCAAGCCATGCCTCTGTTAGGCTTATTGCTTTCAACTTAGGTTATCTTCCTGGTGGTGACAAAGAAATAATAACAAGATCGGAGACAACATTATTAGCACTTGAAGCTGCTAAGAGAATTTTAATGCCAGGAGGGCTTATCAGCTTAGCGGTTTATGTGGGGCACCCTGGAGGGTAG 402 0.4179 MDWFGLDISVVTTRVWRHVVQKGDTVVDATCGNGYDTLALLNLVADDSHKGFVYALDIQKDALDNICHSKMEEVIPSHASVRLIAFNLGYLPGGDKEIITRSETTLLALEAAKRILMPGGLISLAVYVGHPGG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0855 133 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 11 65 IPR010719 -
Lele12g0855 133 Pfam Putative rRNA methylase 67 133 IPR010719 -
Lele12g0855 133 Gene3D Vaccinia Virus protein VP39 7 66 IPR029063 -
Lele12g0855 133 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 130 IPR029063 -
Lele12g0855 133 Gene3D Vaccinia Virus protein VP39 67 133 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0855 Lele-ChrLele12 16474852 16475477 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0855 12 16474852 16475477 Lele12g0855 12 16474852 16475477 ECH
Lele09g0459 09 3387343 3389587 Lele12g0855 12 16474852 16475477 hybridization
Lele10g0424 10 2983822 2991784 Lele12g0855 12 16474852 16475477 hybridization