Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0853 ATGGATGTTATATATCCGCAATTTTCTCTGCTAACCTTAACATATGCTTTATTATTCTTTTTGTCTGTTATTGTACCAGGTTTATTTTATTGCTTTCGTCTCCATCGAGAAATAACATTAATGGCGATGCCTCTAAGCACGACTTACATCAACTGGGAAACCTCTTTGCAAACCATGGCGAACGATGCAGAACTGATGAGCAGTTACTACAATTCCTTCTTCCATGAAGAAACACCACCACCACTACCACTAGATTATTATTCAGATCATGAAACCTTCTTCCTTACTAATAATAATCCAAACAGTTCATTGTTTGATTATTTTTACTCCTCACCAGAATTAACCTACCTTCCTCCTCAATATCACACACCATCACTGCTACTCTCTGAACACAACGTTAACATGTTCCCCAGTGATGATCAGAGCTTCCAATATCCCTACCCGAATAAGCGCCAGAAGTTAAGCTTTGAAGATAATTATCAGTTACCATATTGTAATGATAATTATTTCTGTGATGGGTTTGAAGATAATTATTATCCTTACTACTGTTCTTCATTAATGACGGAGTTCAATGATATTGAAGGAGTTCCACCGCTGAAGCTTCCGGTGGTGCCGGAGAGTGAGGTGAAGGAGGTGGCGGGGTCTGAGAGGACAGTGTCGGCGCAGAGCGTGGCGGCGAGAGAAAGGAGGAAGAAGATAGCGGAGAAGACACAGGAGCTGGGGAAGATGGTGCCAGGTGGGAATAAGATGAACACAGCTGAGATGCTTCTTGCAGCTTCAAAGTATGTAAAGTACTTGCAAGCTCAAGTTTCCATGCTTCAGCTTATGAACACACTCACGGAAGAAAAAGAATCAACTTCAAGGGATAACCAAGACGAGCAATTACAAGCAATGCTTGGCAGTGCTAGTGTTGAAGAGAAGCTCTACTTGGTGGAAAAGTGCTTGGTCCCACAACACTTAGTCACCACCTTGACAAACCATTCTGATATCCAAACAAAAACTTCCATTCTCAAAGATCTTAATCAGCTCAACATTGTCAGAGACACTGATCAGAAGAAGAAACAGCTCCAATAA 1074 0.4134 MDVIYPQFSLLTLTYALLFFLSVIVPGLFYCFRLHREITLMAMPLSTTYINWETSLQTMANDAELMSSYYNSFFHEETPPPLPLDYYSDHETFFLTNNNPNSSLFDYFYSSPELTYLPPQYHTPSLLLSEHNVNMFPSDDQSFQYPYPNKRQKLSFEDNYQLPYCNDNYFCDGFEDNYYPYYCSSLMTEFNDIEGVPPLKLPVVPESEVKEVAGSERTVSAQSVAARERRKKIAEKTQELGKMVPGGNKMNTAEMLLAASKYVKYLQAQVSMLQLMNTLTEEKESTSRDNQDEQLQAMLGSASVEEKLYLVEKCLVPQHLVTTLTNHSDIQTKTSILKDLNQLNIVRDTDQKKKQLQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0853 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 279 IPR036638 GO:0046983
Lele12g0853 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 217 266 IPR011598 GO:0046983
Lele12g0853 357 Gene3D - 216 298 IPR036638 GO:0046983
Lele12g0853 357 Coils Coil 276 296 - -
Lele12g0853 357 SMART finulus 223 272 IPR011598 GO:0046983
Lele12g0853 357 Pfam Helix-loop-helix DNA-binding domain 225 267 IPR011598 GO:0046983
Lele12g0853 357 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 222 318 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0853 Lele-ChrLele12 16469106 16471192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0853 71 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 34.173 6.80e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele12g0853 HLH 7.6e-06 No_clan