Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0852 ATGGCATCTTCTCTTCTAACTCGGATGTTTTTGGGTCCTCGCCTCATTCATTCTTCGAGGCCCCATATACCCATTTCTTTCTTCAATAAGAGCTCGTTTCCTTCACAAGCCATCCCAGCCTATACTCCTCAAAAAACAAGAACAACTGGTTGGGTTCATTTTGTCATGGCTTCTTCCTCCATTGGAACAAGAACTTCTTACTCGACAGTGTCTTCATCTACAGATGATCCTGTTGTTTCTGTGGATTGGCTCTATGCTAATCTTAAGAAGCCTGATTTGAAGGTGTTGGATGCCTCCTGGTACATGCCAGATGAACAGAGGAACCCAATTCAAGAATATCAGGTTGCTCACATTCCCGGGGCCCTTTTCTTTGATTTAGATGGAATATCTGATCAATCTTCAAATCTACCACACATGTTGCCATTAGAAGAAGCTTTTGCTGCTGCTGCTTCTGCTCTTGGGTTAGAGAATAAAGATGGATTGGTCGTTTATGATGGAAAAGGAATATTTAGTGCAGCTCGTGTATGGTGGATGTTCCGAGTTTTTGGGCATGACAGAGTTTGGGTGTTAGATGGTGGTCTGCCAAGATGGCGTGCGTCAGGATATGACGTTGAATCAAGTGCTTCTGGTGATGCTATATTGAAGGCTAGTGCTGCAAGTGAGGCCATAGAGAAAGTATACAAGGGACACGTAGTTGGGCCAATCACATATAAGACTAAATTTCAGCCACATCTTGTTTGGACAATGGAGCAGGTCAAGAAAAATATTGAGGAAAAAAGTCACCAACATATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGTGCCAGAACCCCGTAAGGGTATTACAGGTGGTCATGTGCCTGGCAGCAAGTGCATTCCTTTTAGCCAGGTACTGGATGCTTCACAAACATTGCTACCAGCAGATCAGCTTAAGAAGCGATTTGATGAAGAAGGAATCTCTTTGGAAAATCCAATAGTGGCTTCTTGCGGTACTGGAGTAACTGCTTGCATTCTTGCATTGGGTCTGCATCGTCTTGGAAAATCTGATGTTCCAATCTATGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACACCAGTTCAAACTTCTGAAATGCAATAA 1131 0.435 MASSLLTRMFLGPRLIHSSRPHIPISFFNKSSFPSQAIPAYTPQKTRTTGWVHFVMASSSIGTRTSYSTVSSSTDDPVVSVDWLYANLKKPDLKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISDQSSNLPHMLPLEEAFAAAASALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYKGHVVGPITYKTKFQPHLVWTMEQVKKNIEEKSHQHIDARSKPRFDGAVPEPRKGITGGHVPGSKCIPFSQVLDASQTLLPADQLKKRFDEEGISLENPIVASCGTGVTACILALGLHRLGKSDVPIYDGSWTEWGAQSDTPVQTSEMQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0852 376 FunFam Sulfurtransferase 242 373 - -
Lele12g0852 376 CDD TST_Repeat_1 78 201 - -
Lele12g0852 376 ProSiteProfiles Rhodanese domain profile. 257 371 IPR001763 -
Lele12g0852 376 ProSitePatterns Rhodanese signature 1. 113 124 IPR001307 GO:0004792
Lele12g0852 376 ProSiteProfiles Rhodanese domain profile. 89 206 IPR001763 -
Lele12g0852 376 ProSitePatterns Rhodanese C-terminal signature. 352 362 IPR001307 GO:0004792
Lele12g0852 376 MobiDBLite consensus disorder prediction 263 284 - -
Lele12g0852 376 FunFam Sulfurtransferase 71 213 - -
Lele12g0852 376 Gene3D - 243 374 IPR036873 -
Lele12g0852 376 PANTHER THIOSULFATE SULFERTANSFERASE 72 374 IPR045078 GO:0016783
Lele12g0852 376 Coils Coil 249 269 - -
Lele12g0852 376 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 250 374 IPR036873 -
Lele12g0852 376 SMART rhod_4 247 368 IPR001763 -
Lele12g0852 376 SMART rhod_4 79 203 IPR001763 -
Lele12g0852 376 Pfam Rhodanese-like domain 249 364 IPR001763 -
Lele12g0852 376 Pfam Rhodanese-like domain 80 199 IPR001763 -
Lele12g0852 376 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 207 IPR036873 -
Lele12g0852 376 CDD TST_Repeat_2 248 364 - -
Lele12g0852 376 Gene3D - 70 212 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0852 Lele-ChrLele12 16462619 16468589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0852 56 374 Sulfurtransferasese or Rhodanese AT1G79230 77.116 0.0 538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0852 12 16462619 16468589 Lele12g0852 12 16462619 16468589 ECH
Lele09g0461 09 3394897 3402230 Lele12g0852 12 16462619 16468589 hybridization
Lele10g0425 10 2992303 2998050 Lele12g0852 12 16462619 16468589 hybridization