Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0851 ATGCTTCGTCATCTGCCAACTGTCTCACGTCGTTTTCTGCTTATCTCGACTGCAAAACCTTCGCAAGTATTCACTTCTGCCAGCTGTTCGACCAAATGTCCAGCCCAAGTTGAAGAGGCAGCTGAAAACATTACAGATCAATCAACGGATGCTGTTCAGGTTTTCAGGGAATGGGGTTGTAATGATGACGATTTGGCGAAGATTTTGAAACGTAACCCATATTTGCGCAACTCCAATGCTTCGCTGCTTCAGTCAAAGCTCGCTCAGCTAAGTCGCTACGGTCTAGAGGCACCTGACCTGGTGAGGATAATCAATTGTAGGCCTAGATTTCTAAGCAGTCGGGTCAATCGTTATTTGGACGAGAGGCTTGCATATCTTGATTCCTTGTTTGAGTCCAAGGCATTGCTTAAGAGAGCACTTGTGACCAACCCTTCAATCTTAATCTATGATTTTGACAAAACCATCGCACCTGTTCTTGCACAATATGAAGAGTTGGGTATAAGCAAAGAGGACTTTCTTTTCATGACCTGTTCCCGGCCCACACTTATTTCAAGGACTTCTTTTAATGAGGAGAAGCTGGAATATATACGCAAGATTGGGCTATCCCCGGATTCAAAGAGGTATAAATTTGTTGTATCAATAATTGGTATCTCTCGACTGGAAACAATTCGTGAGAAGATAGCAAATTTTGCCAAATTTGGTTTCTCTGATGAAGAGATATTTGAGTTTATTGGGCGGTCTCCTTTTGTTTTGACACTATCAATTGAAAAGGTTCAGAGGAATATGACGTTCATATTGGGCACAATTAATTTAGAAGCGAAAATAGTTCTTAATAATCCACATCTCTTGCTTATGAACCTAGATACCAAAATGAAACCACGGTTTCTCCTGCTGAGGAAGGTTGAAGACATGGGTTCTAAGTCTAAATGTCCACAACTTCCAATTGTTAGTGTTCTGAGGATGAGAGAGAAGACGTTCATAGCGGCATTCATTGAATGCCACAGTAAGGAAGTGGCCAATGAATTATTGGAATTCTATATGAAGGCAAAAGAAGTGAAGAGATTAGCAGAATCATCAAGGAAGTGTGTGCATGTCGGATTTCCATTTTGA 1110 0.4117 MLRHLPTVSRRFLLISTAKPSQVFTSASCSTKCPAQVEEAAENITDQSTDAVQVFREWGCNDDDLAKILKRNPYLRNSNASLLQSKLAQLSRYGLEAPDLVRIINCRPRFLSSRVNRYLDERLAYLDSLFESKALLKRALVTNPSILIYDFDKTIAPVLAQYEELGISKEDFLFMTCSRPTLISRTSFNEEKLEYIRKIGLSPDSKRYKFVVSIIGISRLETIREKIANFAKFGFSDEEIFEFIGRSPFVLTLSIEKVQRNMTFILGTINLEAKIVLNNPHLLLMNLDTKMKPRFLLLRKVEDMGSKSKCPQLPIVSVLRMREKTFIAAFIECHSKEVANELLEFYMKAKEVKRLAESSRKCVHVGFPF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0851 369 FunFam Mitochondrial transcription termination factor family protein 119 340 - -
Lele12g0851 369 Pfam mTERF 53 143 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 Pfam mTERF 114 326 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 PANTHER CGI-12 PROTEIN-RELATED 28 335 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 SMART mt_12 173 202 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 SMART mt_12 273 305 IPR003690 GO:0003690|GO:0006355
Lele12g0851 369 Gene3D Transcription termination factor 3, mitochondrial 113 340 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0851 Lele-ChrLele12 16458026 16459135 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele12g0851 mTERF 2.5e-28 No_clan