Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0844 ATGGCAAAGTGTAATCGACTGGTGCGCCAAATGTATGGAGTGTGTTGGTTGTGCATAGACGCACCGTCCCCACTAGAGATGCCACGCGCGTCTTCGTTATCTTCTCATCCCTCCGTTTGTTTTTCTCTCTCTCGCATGTCTTCGTCTTTTATGACGTTGATGCCATACCACAGGCACACTCCTCCTCCCATGGCCTCCTCCTCCACCCTCTTGTCTTCAAACCCCAGGGTTTTCTCTTCCACCATCTCCGATCATCATCATCATCATCACTGCTGTCCTCTCTCTCAACCTCCCACCATTCCCAAATCCTTCAGTGGCCTCTGCAAACCTTTCCATTCTCGAGTTCCCACTTCGATTCGCCGTCGAGGCTTCTTCGTCAAGGCTACGGTAATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACTGATTTCCAGAAAAAAGTCCTATATCTAGAGTCTATTGGTATTGATTCTTTCTCACTTATTGAAAATCATCCAAGCATCATCTCTGCCTCCTCTCTGCCTGAAATAAAATCCACTGTGGAATTCTTGACATCCATGGACTTCTCTGCAATTGAGTTCCGGCGCATTGCTGGAATGTGCCCAGAGATTCTCACATCCAGAGTATCAGATATTTTACCTGTCATCACCTTCCTGATCCGTGAAGCTCGTGTGAATGGGTCAGATATCAAGCGTGTCATAAACCGTCGTCCCAGATTGCTTGTCTGCAGTGTTACTGAGCAACTTCGCCCCACCCTGTACTTTCTCCAGACCATTGGCATTGCAGAAGTAAACAGGCACACCTACTTGCTATCATGCAGTGTTGAAGAAAAGCTTATTACCAGGATCGATTACTTTGAGAATATAGGGTTTTCTCGCCGTGACGCGACTTCAATGTTTCGAAGGTTTCCTCAGCTGTTTAACTATAGTATTAAGAACAATTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAGCTGAAAGAATTCCCCCAGTATTTCTCATTTAGCTTAGAGGGTAGAATCGAACCTAGGCATAAACATTGTGTAGAAATGGGTGTTTGTTTTCCTCTCCCTGTGTTATTAAAGACAAATGAAGCGCAATTTCGTAATAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTTTATGGTGTTCAAATTGTGAAGTTGATTCAATATAG 1227 0.4434 MAKCNRLVRQMYGVCWLCIDAPSPLEMPRASSLSSHPSVCFSLSRMSSSFMTLMPYHRHTPPPMASSSTLLSSNPRVFSSTISDHHHHHHCCPLSQPPTIPKSFSGLCKPFHSRVPTSIRRRGFFVKATVIKWRCPKQILPPNCDTDFQKKVLYLESIGIDSFSLIENHPSIISASSLPEIKSTVEFLTSMDFSAIEFRRIAGMCPEILTSRVSDILPVITFLIREARVNGSDIKRVINRRPRLLVCSVTEQLRPTLYFLQTIGIAEVNRHTYLLSCSVEEKLITRIDYFENIGFSRRDATSMFRRFPQLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLEGRIEPRHKHCVEMGVCFPLPVLLKTNEAQFRNRLDVCVNSSTPLKTSPLWCSNCEVDSI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0844 408 Pfam mTERF 229 379 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 Pfam mTERF 134 228 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 FunFam Transcription termination factor MTEF1, chloroplastic 223 387 - -
Lele12g0844 408 Gene3D Transcription termination factor 3, mitochondrial 163 387 IPR038538 -
Lele12g0844 408 SMART mt_12 235 266 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 SMART mt_12 301 333 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 SMART mt_12 267 296 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 SMART mt_12 334 365 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Lele12g0844 408 PANTHER CGI-12 PROTEIN-RELATED 155 384 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0844 Lele-ChrLele12 16427916 16430243 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele12g0844 mTERF 1.3e-30 No_clan