Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0839 ATGGGGAAGAAGCAGAAGCAGAAGGTGATTCTGCCGCCGGAACTCCCTCCGGAGATCTCGGAGGACGAAATTGAAGTTTCCGATGAAGACCTGGATTTCGTCCGGGAGAACCGTGACTATGCTGGCTTGATTTCAACCTTGGACACCCAGTCCATTACCAAACATGTGACTCGAGTTGCTGATGCCAAAGAGGATGACTTGGAGGCCCTTTATGAGAAACGCATGAGAAAGAATGCTCTGAAGAAAGAAACAGAGGAAAGTAGTGTTCAAGTTGATCGTGTAGACGCTCTTCCTGTGAAGACCTTAGATGGAAAACTCTTCTACCGAACAGTTTCAAAGACAGAAAATGGTGCAGCTGAAGAGGAAATTGGAGACAATGATGATAATGCGGATAAAGGTTTAGTGAAGCTAAGTAAGGCTGAAAAGAGAGCTAAACTCAAGAAAATGCGAAAAGAGGCAAAGAAGCAAGGGAAAGAAGTGGCTGATACAGAGGTGCAGCCAGCACCACAAGCAGCAGTACTGGCTGAGGTAAAACAAGACCTTACTGCTGAGGAGGCACTTGAAAATAAGAAACTTAAGCTTGCAGAGCTTGGAAATGCCTTGCTTACAGACCCAGAATCTAATATTAAGTTGCTGAAAGAGATGATTCAAATCTCCAAGGAAAATGATCAGAGCATTGTTAAACTTGGACTGCTATCACTCTTGGCTGTTTTTAAAGACATTATTCCTGGTTATCGTATTAGGCTGCCCACTGAAAAGGAATTAGAAATGAAGGTTTCAAAAACTGTCAGAAAGATGCGTTATTATGAGTCCACTCTTCTTTCAGCATACAAGGCATACCTCCAAAGACTGATAGACCTAGAACATCAGCCCTTATTTCAGCATGTTGCAGTTCGTTGTATTTGTACCTTGCTTGATGCTCATCCACATTTCAACTTTCGTGAAATCTTGTTGAGCACTGTTGTCGGGAACATAAGTTCTACGAATGATGCTATAAGAAAACTCTGCTGTTCTACAATTAAGTCTCTATTTACAAATGACGGTAAACATGGTGGTGAAGCTACTGTAGAGGCTGTTCGGTTGATTGCTGATCAAGTTAAAGCTCATAATTGTCAATTACATCCTGAATCCATTGAGGTTTTCCTGTCTCTTTCATTTGATGAGGATCTAAGGAAGTCTGAAAAGACAGACGATGACCATAAATCAAAAAAGAAGAAAAATAAGAAAAGAAAAAATATGGATGCATCAAATCAATTGCAACAGAATGAAAGAAAGAAGAGCAAGAAGGAATTGATGTCAAAGATGAGAGAGCAGGTTGAAGCTGATTACAAGGCTGCATCTCTTACACCAGATGCTATGGAGCAGAGACAAATGCAATCTGAAACACTATCTGTAGCGTTTGAGACATATTTTCGTGTTTTAAAGCACACAATGGAGTCCTCAGCTATAAGACCTGAAGCAAATTCTGGGACATCATCTGATGCAGTTGGATCCCACCCATTGCTTGCTCCATGTCTTAAAGGACTTGGAAAATTTTCGCATCTGATTGACCTTGATTTCATGAATGATCTCATGATCCATCTGAAAAAGCTTGCTTCTGGTGGTAGCAACTCAAGCAACACTTCTGAGAAGTTTACTAAATGTTTGACTGTATCTGAGCGTCTCCAGTGCTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGACGCCTTGAATGTTGATTTACAAGATTTCTTTGTCCATCTTTACAATCTTTTACTTGAATACAGGCCAGGAAGAGATCAAGGAGATGTGCTAGCAGAAGCGTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAACGTCTGGCTACAATTTCATTGTCTTTTGGATCTCCAGAGTCCATGGCCGCATTAGTCACAGTGAAGCATATCCTTCAGAAGAACGTGAAGTGCAGAAATCTGTTAGAAAATGACACTGGAGGAGGCTCTATTGCGGGCATGATTCCAAGATACCAACCAAATTCCAGAGACCCCAGTTTAAGTGGTGCTCTCGCCTCAGTATTGTGGGACCTCAATCTTCTGTCTAAGCATTATCATCCAGCTATATCCACAATGGCCTCTGGCATTTCAAGCATGAGTACTGGTCATAACCAAGTTTTTCTCTCCAATATTTCTCCTCAACAAGCTTTCAAGGACATGTCCCATGAACAAGAACTTCTTTCCCCACAAAGTGGCAGTATGAAGCTAAATATCAAGAGGAAAAGAGCAAGTGGAGCTACCCCATCTCCTTCAATTGGATCTACAGCAGATTCAAGTTCATTTGATGAGGATGAGTTGAAGAAGAAACTTGCTTCCCATTTTATGATTCTGCACGACATTAAGGAGAATGAAAGATTCAGAAGGGAGTTGGGTAAGACTACGCTGTCTCTTGAGCTTTATAAACAGTATAAGAAACAAAAGAAGAAAGGATCAAAGACTAAAAAAGCAAAGCTTAGTGATGAGGCTTGA 2520 0.4087 MGKKQKQKVILPPELPPEISEDEIEVSDEDLDFVRENRDYAGLISTLDTQSITKHVTRVADAKEDDLEALYEKRMRKNALKKETEESSVQVDRVDALPVKTLDGKLFYRTVSKTENGAAEEEIGDNDDNADKGLVKLSKAEKRAKLKKMRKEAKKQGKEVADTEVQPAPQAAVLAEVKQDLTAEEALENKKLKLAELGNALLTDPESNIKLLKEMIQISKENDQSIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLIDLEHQPLFQHVAVRCICTLLDAHPHFNFREILLSTVVGNISSTNDAIRKLCCSTIKSLFTNDGKHGGEATVEAVRLIADQVKAHNCQLHPESIEVFLSLSFDEDLRKSEKTDDDHKSKKKKNKKRKNMDASNQLQQNERKKSKKELMSKMREQVEADYKAASLTPDAMEQRQMQSETLSVAFETYFRVLKHTMESSAIRPEANSGTSSDAVGSHPLLAPCLKGLGKFSHLIDLDFMNDLMIHLKKLASGGSNSSNTSEKFTKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFVHLYNLLLEYRPGRDQGDVLAEALKIMLCEDKQHDMQKTAAFIKRLATISLSFGSPESMAALVTVKHILQKNVKCRNLLENDTGGGSIAGMIPRYQPNSRDPSLSGALASVLWDLNLLSKHYHPAISTMASGISSMSTGHNQVFLSNISPQQAFKDMSHEQELLSPQSGSMKLNIKRKRASGATPSPSIGSTADSSSFDEDELKKKLASHFMILHDIKENERFRRELGKTTLSLELYKQYKKQKKKGSKTKKAKLSDEA 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0839 839 Pfam CBF/Mak21 family 555 710 IPR005612 -
Lele12g0839 839 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Lele12g0839 839 MobiDBLite consensus disorder prediction 392 432 - -
Lele12g0839 839 Coils Coil 139 166 - -
Lele12g0839 839 MobiDBLite consensus disorder prediction 735 777 - -
Lele12g0839 839 SUPERFAMILY ARM repeat 210 624 IPR016024 -
Lele12g0839 839 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 818 IPR016903 -
Lele12g0839 839 MobiDBLite consensus disorder prediction 735 754 - -
Lele12g0839 839 Coils Coil 405 425 - -
Lele12g0839 839 PIRSF Noc3 1 837 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0839 Lele-ChrLele12 16370879 16377959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0839 1 807 Core DNA Replication Machinery Family AT1G79150 58.946 0.0 911