Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0837 ATGAAGCATTTGATTCGCAGGCTTGCCCGGGTCGCCGACTCGTCTCAGTACACTCTCCTCAGATCCGATTCGCAGAGCCGTCGTCCTCGCCGAGTTCTCGCATCTGCAGGGAGGAACAGGCGGCATCGGGCGAGGGCGTCGGCGTCGGAAGGTCACGTGCCGATCTACGTAGGAGACGAGATGCAGAGATTTGAGGTGAACGCGGAGCTGCTGAACCACCCGATCTTTGTGAGGCTTCTGAACAAATCTGCTCAGGAATACGGATACGAGCAGAAGGGCGTGCTCCGAATCCCCTGCCATGTCTTCGTCTTCGAGCGCGTCCTTGAAGCTCTTCGTCTGGGACTCGACGACGCGCGTGACCTCCACGACCTACTCTGTTCCTCATCTGAAGAGTTTTGCTAG 402 0.5796 MKHLIRRLARVADSSQYTLLRSDSQSRRPRRVLASAGRNRRHRARASASEGHVPIYVGDEMQRFEVNAELLNHPIFVRLLNKSAQEYGYEQKGVLRIPCHVFVFERVLEALRLGLDDARDLHDLLCSSSEEFC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0837 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 107 IPR003676 GO:0009733
Lele12g0837 133 Pfam Auxin responsive protein 8 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0837 Lele-ChrLele12 16350904 16351305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0837 50 118 Calmodulin-binding Proteins AT4G31320 40.580 2.35e-14 64.7