Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0836 ATGAAAAGGATCCTGAGAAGGAAACACTTGTGGATTGGAAGTGAGAAGGAGTTCATGGTCGCAGAAACTATGCAAACTCATCTAACAATAAATGAGGATGCAAGCAAGCAAGCTAGTGAACAAGAAGGATATATGAAGATGGAAGTAGTTGTGTTCTCTCTCTCTCTCGCTGCATCATGTTATTCTGGCAATCAACCATTGATATATGAGAATGTTCCCAGTCATAATGGTGATGGGGCAATGAAGAAGGAGAAAGTTCACGAGGGGCAATTGAAGAGGGGTCTCTGTTCTGAATTTGTTTCTGAGATGAACGTGAACCATCACTTCTTTGCCATTAATGAACTGCCTTCCCCTCACTTTTGTGGACGGAAAGAGAAGCTTGTTTCGAGGGTTATCATATTTGATTATCAAAAGGGTTTAGGAATCATCCCAGATGAATTGCACGACTTGGAGATTCCTTCCCCCGTTGAGGTCATGAGAGAGCGCGTTGAGTTTCTTCAGAAGTTGGGCTTAACCATTGATGACATTAATGAGTATCCTTTGATGCTGGGATGCAGTGTGAGAAAGAACATCATACCTGTATTAGGGACATTGGATGTGTTGCAAAAGTATCCTGAGCTTTTGGGGTTCAAGCTTGAGGGTACCATGAGTACTTTGGTCGCTTATCTTGTTAGTATCGGGGTCAATCCGAGAGATATCGGTCCCATGGTGATGCAGTACCGTTATTTTTTGGAGATCAGAGTTGGGACTGTGAGTAAACCTCTGATTGATTACTTGGTCTCTTTAGGACTGCCCAAGAAAATTATAGCTAGAATGCTGGAGAAGAGACCCTATATACTCGGTTACTATCTTGAGGAGACAGTTAAACCTAATGTGGATTGTTTGATTAGTCTTGGAATTAGGAAGGAATCGGCGCCTTTAGGTATTGCTCAGTATCCGCCGATCCTCGGGCTGCCTCTCAAGGCTAAGCTGTCTTCACAGCAGTACTTCTTCAGTTTGAAGCTTAAGATCGACCCCGAAGGATTCGTGCGAGTGATAGAGAAGATGTCACAGGTGGTTAGCCTTAATCAACGTGTGATAATGAAACCGGTTGAGTTCCTCCTAGCGAGGGCAATACCGTCGCATGATGTGGCCAATATGGTGATCAAATGCCCTCAATTAATAGCAGCAAGAGTTGAGCTTATGAAGTACAGTTTTTACTTCTTCAAGAGTGAGATGGGGAGACCCATAAAAGAGCTTGTGGAATTTCCAGAATACTTTACATATAGCTTGGAATCCCGGATCAAACCCAGATACCAGAGGATGAAAAGCAAGGGGATAAGGTTTTTATTAAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAAGATAGATTGCAAGGTAATTACATTGAAACTGAAACCGCAGGCCCATCGTTCTGTATGGGTGGGAAGTTAGAGCTACCAGGTAATGAGATAGTGTCAGATGAGGAAGAAGAGAGTGATAACGAAGAACTACATAGACTAACTGTTTCTCTTTAG 1521 0.426 MKRILRRKHLWIGSEKEFMVAETMQTHLTINEDASKQASEQEGYMKMEVVVFSLSLAASCYSGNQPLIYENVPSHNGDGAMKKEKVHEGQLKRGLCSEFVSEMNVNHHFFAINELPSPHFCGRKEKLVSRVIIFDYQKGLGIIPDELHDLEIPSPVEVMRERVEFLQKLGLTIDDINEYPLMLGCSVRKNIIPVLGTLDVLQKYPELLGFKLEGTMSTLVAYLVSIGVNPRDIGPMVMQYRYFLEIRVGTVSKPLIDYLVSLGLPKKIIARMLEKRPYILGYYLEETVKPNVDCLISLGIRKESAPLGIAQYPPILGLPLKAKLSSQQYFFSLKLKIDPEGFVRVIEKMSQVVSLNQRVIMKPVEFLLARAIPSHDVANMVIKCPQLIAARVELMKYSFYFFKSEMGRPIKELVEFPEYFTYSLESRIKPRYQRMKSKGIRFLLNWMLNCSDQRFEDRLQGNYIETETAGPSFCMGGKLELPGNEIVSDEEEESDNEELHRLTVSL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0836 506 MobiDBLite consensus disorder prediction 487 506 - -
Lele12g0836 506 Gene3D Transcription termination factor 3, mitochondrial 250 466 IPR038538 -
Lele12g0836 506 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 343 373 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 147 172 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 SMART mt_12 378 409 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 FunFam Transcription termination factor MTERF4, chloroplastic 248 464 - -
Lele12g0836 506 PANTHER CGI-12 PROTEIN-RELATED 199 460 IPR003690 GO:0003690|GO:0006355
Lele12g0836 506 Pfam mTERF 199 456 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0836 Lele-ChrLele12 16340069 16343752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele12g0836 mTERF 1e-78 No_clan