Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0834 ATGATAAATAATTGCGCCAATTCGTCTGTAGTTTTGATCGACGCCGGATCGACCGTCATGGCCACTTCGCCGGTGAAAAAGATCGAACTTGCCCACCAGCTGTACCGCGACGGATGGTACGGCGACGCGCTAGGTTTCTACACGGAAGCTATTGGGATGGCTAAGACTAAGGCTCAGAAGATCGCTTTGCATAGTAATAGAGCTGCTTGTTATCTGAAGCTTCACGATTTCAAGAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATCACGAGCACAGGGGAGCGTTGATGCTGCGGGCTCAGACACTGGTCACCCTTAAGGAGTACCATTGGGCACTTTTCGATGTCAACCGGCTCTTAGAGTTGGATCCATCCTCAGAGGTGTATCAAAATCTTCAAGCTCGCTTAAGGACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGACCAGGGAGATGATGAAGATGAGGAGACAGTAAAAGGAGATAACAAATGGGAAAAATCTCCAGAGAAAGATGTTGGGAGAGATCAGAAAGATGAACTTGACAAGGCTACTACTATTAGTGCTGAAATAGACTCCAAGTTGTCATCTGAACAAAGAATAGACCAAAACTCCAAGCCAAAAACTTCCTCATCAGAGACAATTGCCAATGCACCAAAAGAGGAACCGGCTGAGCAACAAACCAAAGCATGGCAATCGATTCCAAAACCGAAAGGGCATTCAGCTTTAAACTATGCACGATGGGACAGTGTCGAAGATGATTCTAGTGAAGATGACGATGATGATGATGATGATGAAGATGAAGAAGAATCTCAGCCCCAGTACCGATTTCGTGTGAGAACCATAGGTGTACGATCGGTAAAACCTTTGAATCCTAGGGAAGTACTGGCTTTTCATGGTCAGATGAGTTTCCTGACTCCGAAATTCACATAG 954 0.456 MINNCANSSVVLIDAGSTVMATSPVKKIELAHQLYRDGWYGDALGFYTEAIGMAKTKAQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHEHRGALMLRAQTLVTLKEYHWALFDVNRLLELDPSSEVYQNLQARLRTQLSLAPIPESEEEFEDQGDDEDEETVKGDNKWEKSPEKDVGRDQKDELDKATTISAEIDSKLSSEQRIDQNSKPKTSSSETIANAPKEEPAEQQTKAWQSIPKPKGHSALNYARWDSVEDDSSEDDDDDDDDEDEEESQPQYRFRVRTIGVRSVKPLNPREVLAFHGQMSFLTPKFT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0834 317 MobiDBLite consensus disorder prediction 149 163 - -
Lele12g0834 317 MobiDBLite consensus disorder prediction 209 224 - -
Lele12g0834 317 SUPERFAMILY TPR-like 28 141 IPR011990 GO:0005515
Lele12g0834 317 Gene3D Tetratricopeptide repeat domain 26 157 IPR011990 GO:0005515
Lele12g0834 317 MobiDBLite consensus disorder prediction 145 283 - -
Lele12g0834 317 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 20 295 - -
Lele12g0834 317 SMART tpr_5 95 128 IPR019734 GO:0005515
Lele12g0834 317 SMART tpr_5 61 94 IPR019734 GO:0005515
Lele12g0834 317 SMART tpr_5 24 57 IPR019734 GO:0005515
Lele12g0834 317 MobiDBLite consensus disorder prediction 164 194 - -
Lele12g0834 317 MobiDBLite consensus disorder prediction 259 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0834 Lele-ChrLele12 16334165 16336524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0834 26 142 Calmodulin-binding Proteins AT3G25230 34.884 1.40e-13 69.3