Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0830 ATGAGAGAGTGTGGTAGATCAAAGCAAGGTACAATGTCGCCATGTGCAGCCTGCAAGCTTCTGAGAAGAAGATGTGCACAGGACTGTGTGTTTGCTCCTTATTTTCCAGCAGATGAACCCCAGAAATTTGCCAGTGTTCATAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGTACCAACGAAGTGATGCAGTGAGTTCAATGGTTTATGAAGCAAACGCAAGAGTGAGAGATCCTGTTTATGGCTGTGTTGGAGCCATATCCTCTCTGCAACACCAAGTCGATGTTCTTCAAACCCAATTGGCTCTCGCTCAAGCCGAAGTTGTTCACATGAGATCTCTCAGTCATCATCAGTTGTCTTCTTCATCATCACCACCACCAACAACAACTGAGACTGTAGCAGTGCCAAATTACACATCATCGTCAGATCATCACAGTCACTTCAACAATATTATGTCTCCTTCATCGTTAAGCAGGCTCAGTGCCAAGTCCTTTTTTGCCATGGACGTGGGCGAGTCTCTGTGGTCCTGCTAG 552 0.4547 MRECGRSKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEYQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLALAQAEVVHMRSLSHHQLSSSSSPPPTTTETVAVPNYTSSSDHHSHFNNIMSPSSLSRLSAKSFFAMDVGESLWSC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0830 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 146 - -
Lele12g0830 183 Coils Coil 93 113 - -
Lele12g0830 183 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lele12g0830 183 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Lele12g0830 183 MobiDBLite consensus disorder prediction 121 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0830 Lele-ChrLele12 16305322 16309394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0830 1 183 AS2 family AT1G16530 56.522 2.07e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele12g0830 LOB 3.8e-43 No_clan