Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0812 ATGGAGTACAACGACTCGTTTGAAACATGGCTTCATGATCTTGAAAAAGAGGTGGATCCTTGTTCTTTATTCCCAGAACTTTGCCCAGAGAAAATTTCTTCATCTTCTTCTTCGTCTTTGGATGTTGAAATTACTGCCAATCAGAATGAGACAACATTGTATCATCAAACTGAAACTAGTTCCATTGCTCCTCTCAGTTTCTGTGAGGCTTCTCTTTCATTTTCTTACATGGATGGAAATAGTAATCTTCAAGTTGACGCTGAGAAAAAGGGCGAATCAGAAGGAGACAAGTGGCTTAGAAGCAGCAAAACGACTGCCTTACCCCTTCCACAACACATAGTAATTGAGAGAAAGAGAAGACGAGAACTTAACCAGAAGTTCTTGGCTCTATCAAAAGTGGTAACAAGCAATAAGAAGAAGGATAGAGCTTCTATACTTGGAGAAGCAGTGAAGTACATGGAAGATCTTCAAGAACGCATCAAGAAGCTGGAGGAGAAGAACCAGAAGAAAGTGGTTGAATCTGTGGTTTTTGTGAAGAGCTCGGCGTCGTCGTCGTCTTTGTCGTTGTCGTCTTCTTCACCATCTAGTAGCAGTAATAATCAATATCATTTGCCTTACAGAAGCCATGAAAATAACAATGATAAAGGAGATGATTATTGTAACCCTAGTTACGAGGAAGAAGAAATTGAAGCAAAAGTGATAGAAAGGAGTGTGCTGATTCGAGTTCATTGTGGGAATCATCATAACTACGAGATTCTTCCAACGTTGTTGTCTGCAATTTCAGAGCTTCATTTGATAGTGCTAACTGCTAATGCTATTCCTTTTGGGAATCACATCGACATCACTGTCATTGCTCAGATGGGAGTTAATTTCAGCATGAAGACGAAGGATATTGTGGAGAACTTGCGCCAGGCATTACCAAATTTCATTTGA 933 0.3987 MEYNDSFETWLHDLEKEVDPCSLFPELCPEKISSSSSSSLDVEITANQNETTLYHQTETSSIAPLSFCEASLSFSYMDGNSNLQVDAEKKGESEGDKWLRSSKTTALPLPQHIVIERKRRRELNQKFLALSKVVTSNKKKDRASILGEAVKYMEDLQERIKKLEEKNQKKVVESVVFVKSSASSSSLSLSSSSPSSSSNNQYHLPYRSHENNNDKGDDYCNPSYEEEEIEAKVIERSVLIRVHCGNHHNYEILPTLLSAISELHLIVLTANAIPFGNHIDITVIAQMGVNFSMKTKDIVENLRQALPNFI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0812 310 Coils Coil 146 173 - -
Lele12g0812 310 MobiDBLite consensus disorder prediction 185 220 - -
Lele12g0812 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 156 IPR011598 GO:0046983
Lele12g0812 310 PANTHER BHLH TRANSCRIPTION FACTOR 37 306 - -
Lele12g0812 310 Gene3D - 110 175 IPR036638 GO:0046983
Lele12g0812 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 172 IPR036638 GO:0046983
Lele12g0812 310 Pfam Helix-loop-helix DNA-binding domain 112 157 IPR011598 GO:0046983
Lele12g0812 310 SMART finulus 113 162 IPR011598 GO:0046983
Lele12g0812 310 MobiDBLite consensus disorder prediction 185 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0812 Lele-ChrLele12 16146392 16148294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0812 68 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 32.400 5.97e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele12g0812 HLH 2e-09 No_clan