Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0802 ATGAGCAGCATAAGCGTGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGCGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCTCTCATGATTGATGTTGATCTTAACAAGTGCGAACCATGGGACATTCCTGAATTGAAAAGGATAATGATAGACAAATCAGAAGATACAAAAGCAATTAGTGGAAAGAGGCTAGAGTCATGGGGCCAGGCGTTCCTCAAAAACAGAGAATCTTCAGCGAAACAGAGCATCGGAAGCTGCTACGACGACACAGGATCTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGACCAACAGGCTCAAGCTCAAAATCATCAAGATGACTACGAGCAAGTGCCCTGCTTCTCCATTTTCTCGCAGATCCATACAAACCCTAACCTCAACCACACTATCAGTACAAGCATGATGGAGCCAAATTTAGTAGTACCTGTCAAGAACCACAATGTGACCACCGCATACGGCGGAGTAACGAAGCTAACCCACATGAAGAAGGATCCTGAAATTCCTCTCCACCACCACCATGACCATGGCCGTACAAGCAAGCCTCTTGCTTTATTAATCCTTCAACAAGATGAACTCTGGACAAGGATGGATTCAGAACTTGTTCTTCCCACGTTCCCCACTTTTTCGCTTGAAAATGATCTTAACCCAATCTCTGTTCGTCTCCTAGCGCTCCTGAGCTGTGCAAAACCCAACACAGCAAATTATATGTCGGGGCCAATACTGAAGATTTGCCGTATAACTATCGAATTCGAAACTCCATTTCTCGGTGTTCACATCCCGATAAGCCCGACTCGGCAACTGTTTCGCGACTACTATGATCTGTGCTCAGGCGACCTGGACGAGACGGCATCGTCGGATTCCGAACCAGAATGGGCATGA 945 0.4593 MSSISVVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPELKRIMIDKSEDTKAISGKRLESWGQAFLKNRESSAKQSIGSCYDDTGSSSLPALMDSYISFDQQAQAQNHQDDYEQVPCFSIFSQIHTNPNLNHTISTSMMEPNLVVPVKNHNVTTAYGGVTKLTHMKKDPEIPLHHHHDHGRTSKPLALLILQQDELWTRMDSELVLPTFPTFSLENDLNPISVRLLALLSCAKPNTANYMSGPILKICRITIEFETPFLGVHIPISPTRQLFRDYYDLCSGDLDETASSDSEPEWA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0802 314 SUPERFAMILY NAC domain 3 58 IPR036093 GO:0003677|GO:0006355
Lele12g0802 314 Pfam No apical meristem (NAM) protein 12 58 IPR003441 GO:0003677|GO:0006355
Lele12g0802 314 Gene3D NAC domain 20 92 IPR036093 GO:0003677|GO:0006355
Lele12g0802 314 ProSiteProfiles NAC domain profile. 11 168 IPR003441 GO:0003677|GO:0006355
Lele12g0802 314 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0802 Lele-ChrLele12 16077799 16083564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0802 2 57 NAC Transcription Factor Family AT1G56010 67.797 3.28e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele12g0802 NAM 1.1e-11 No_clan