Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0798 ATGGCAGGCACCTCCAACCATTGCCCTTGCTCGCTGCCACATGCTCCTCTAGCCATTGTTGCTGCCTTCGTTCAAGGTTTCCTTGGTTACTGGCTCTTCTTCAAGTTCTTTCCTTTTATGGGGTCTGGTTTTCCCTCCTTTTCCAGTGCTGGGTTCGTTGGAACTGGATCAGTGAGGGGGTCGTTTAGCTGCTTTTTGGAAGCTTATTTGCGAAGCAATTTGCCTTTGAATGAACGTGATTCGCCGTCTTGTTTCTGGGTCTATGAGAAGGTTGTGGTGATGGAGGATATAGGGTTGTTCAAACAAGGTTGGCAATGGCTTCGATCGCAGAAGGATGCCTACTGGCGTGCCCGAACTGCGTTGAGTTGTTGCAGGGACAAAACTGCCATATTCATCGAGCAACATTGGCCGTTAGTATGCAGTGCCTGCTTCAGATTGGGAAGCATTCTTCGCCTATCGTTGCTTTATTGGAAAGACTGTTTTATGAGGGGCTTTCAGTCGTTCATCAAGCTGGGTCCAGCTATGCTTCTCCTCATAATGTGGTGTTGTCTTCTTAGTTTGACCTCGATGCATTGCTTGATTTATGTACTTATTAGTATGGGTGTTGCTGGAGCTGCTGTTCAGTACTTGGGTTATACTCCTGGCGTCTTCATTGTAGGGCTTTTTGCTATCCTTATGTTGTGGATGTATGCTAACTTCTGGATAACAGGAACGTTGCTTATTGTTGGAGGTTATTTATTCTCCCTAAATCATGCACGCTTGGTGGTACTAATGGCAACCGTGTATGCTTTATACTGTGTCAAAGTTCAAGTGGGATGGCTCGGTGTTTTTCTGTGTGTAAACCTTGCATTCTTGTCCAACGACATTTTGAATTTCCTCCTCCAATGGTTTGATAATGTGAGTGAAAGCAGCTCGCATTCTGAAGACCAGAGACAATCAGAAACAGTTCTGGGAGATGACTTTACTGAAGAGTGTGAATATTCCATTCCTACTGCTGAATCTGAAAATTCACATTCATGTAAATCATCCAGCAAACCAGCTGTTATCACTTCAGTTGTTGAAAACAAGAAAGAGTTTTCAGATAGCAAAGTGGTGAAAGTACAAGCAGATTCTGTTGATGAAATGAGGAGAATATTGAATAGTCTGGATCATTATGATGCCCTTGGATTTCCTCGTCATAAGAAAGTTGATGCAGCAATTCTGAAAAAGGAATACCGGAAAAAGGCGATGCTTGTTCATCCTGATAAGAATATGGGCAGTCCGCTGGCAAGTGAATCATTTAAGAAGCTTCAATGTGCATATGAGGTTCTTTCTGATACCACAAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAAGAATTCAGGGCTAAAAGTGTCTGCCAGAAATCCTATGGTTCTTCACGTCAGGACAATTCTGATTATCGCTCTGAAGAATCCAGGCGTATACAGTGCACCAAGTGTGGCAATTCACATATATGGGACTGTTGTCAGTTTCATCAAGCCAAGGATGGAGATGGATGGGTTGAGTACAAAGGTTCTCTGGCTTTTGAGAGGGCTCAAAAGGGAATGGCTTGTAGGCCAAACACCCATCGCCCGAGCTTCCATGTGAACATGGTTGGCCTGGAGAAAAGCCCGCGATGTAACTCCAGCCGATATCCATGGGATTTAGATGCTGAAATGATGCTCGACGAAGACGAAGAGGCATTCGAGCTGTGGCTTCAGCAGGCTCTCGACGCAGGCCTCTTCTGCGAGACCTCCAAACGCCGGAAGAGCTGGAGTTTCGGTTGTGCCCCTACTGCTCCGTCAGACTCTTATTCACAACCGTGGCATTTCACACTTTTGGACATTATTGCAGCGACAGCTTACTTGCAAAAAGATCCTATGTCTAGTGCGGAGGATAACAAAGAACAAGGACAGATGGATGCAAATACATCTAATGAATCCATGCCATCAACCAAGCAGCAGGAGGAAGTTATAAAGAAAAAATATGGAGGACTACTGCCTAAAAAGCAACCACTTATATCTAAGGACCATGAACGTGCCTACTTTGATTCTGCTGATTGGGCACTTGGAAAGCAAGGAGGTGAAAAACCCAAGGGACCGCTGGAGGCTTTGCGGCCTAAGTTACAGCCAACACAGCAGCAAACGCGTTACAGGAAGTCTTTTTGTGCTCCTTCAGGAGAAGAAGGAGGAAGTGTTTCATCAGAGGATGCACCTTCCAACGAAATCTTGGTTCTCTTTGGACCATGCTTTACTCAACGATTTCCTTCAGAAGTTGTGCGAAACGAAGCTCTAGAGGAAACTGAAGAATGCTATGGTTTGTTTAACACCTCGCCATCGCCATTGCTTCTCCCTCCTTTACCAGATGCTCAAGTTGCAGCTCCAGCCCATTCTACAATCATTCATTTATATAATACAGTGCTCTATACATTCTTCTCTCTTCTCAGTTCTCAGTGTCACAAAATGAGCGGTATCCTTGAACAGACCAACGTATTCAAATCTCTGTTGGTGGGCTGTTTAGAATGCAGAATTTGGTATCGTTGGAGAAGTTGTAAAGCAGATCTGAATTTAGATCACTTCAACATCAGAGTTATTGAACCGGTAGGGTTTGGTTCGTTTAGGAAGGTTTATCGTTGTCATGAACTGAACAGTAATCGAGTTGTGGCCGTCAAGGAGGTTTTCGTTGCTGACGAAGAAGAAGAAGTTGTGATAAATGATAGGATCGAGTTTCTTAAAGATTGCCCTCATGAAAACGTTGTCAGGTTGCTGCATACACTGAAAAGGGGGTGTTATCTCTATCTTGTATTTGAGTATATACACCCTAATCTGTACTATTTCATGAACCTACCAGATCACAATAAATATCCAAATCAAAGAAACATCCTGGCTGCTGTAGCACACTATCATTCTCATGGGCTTCTCCTCCGAGATCTGAAAACTCAAAATCTACTCATGGATTTTCATGATGGTTACCTCAAGTTAGGTGATTTCGGCTTGTACGGTGCATTCGGAGATCCTCAGCCTCGTGATATACCAGTTTCGGAGTATACTGCGCCTGAGGTATTGCTGAATTCGAATCAACATTCGCCGGCGGCTGATGTGTGGGCCGTGGGTTGTATATTTGGAGAGATAGTAACCGGGAAGCTTATATTTTATACTGGCAAAACTAATCAGGAACAGCTAAGGTCCATTTTCAGTTTGTTAGGAGCTCCAACTGAGGAATCTTGGCCCGGAATTAGTGACCTGTGTCCTACACTTTGCTTCTACCCCAAGTTTGAACCACAGGACTTGTCTTCAAAGTTTCCTGATTTGGAACCAGAAGGCATTGATATTCTTTCGGCAGCTGATATGTGGTCTGTGGGTTGTATATTTGGAGATATGATAGCTGGGAAGCCTACGGCTATGTTGATCAGATGTGGAATTTGGTATCCATGGTGGTATGAACCGCCGCCAGCCAAACTACAGGACTACAAGATTATTGGTGAGGATGCTGTATACAATCACTATGGGAAATTGCTGAAGATGTTTCATCAAATACTCTCTGCTGTAGCACATTATCATAATTGTGAGATTGTGATCGGAGATATAAAACCAAAATACCTGCAAATGAAGTGCAATATGGAGATCAAGCTAGCTGACTTCGGTTTCGCCGGTTCATTTGGAGATCCTTGGATAACTTATCCTGTATGA 3693 0.4384 MAGTSNHCPCSLPHAPLAIVAAFVQGFLGYWLFFKFFPFMGSGFPSFSSAGFVGTGSVRGSFSCFLEAYLRSNLPLNERDSPSCFWVYEKVVVMEDIGLFKQGWQWLRSQKDAYWRARTALSCCRDKTAIFIEQHWPLVCSACFRLGSILRLSLLYWKDCFMRGFQSFIKLGPAMLLLIMWCCLLSLTSMHCLIYVLISMGVAGAAVQYLGYTPGVFIVGLFAILMLWMYANFWITGTLLIVGGYLFSLNHARLVVLMATVYALYCVKVQVGWLGVFLCVNLAFLSNDILNFLLQWFDNVSESSSHSEDQRQSETVLGDDFTEECEYSIPTAESENSHSCKSSSKPAVITSVVENKKEFSDSKVVKVQADSVDEMRRILNSLDHYDALGFPRHKKVDAAILKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYEVLSDTTKKRDYDEQLRKEEFRAKSVCQKSYGSSRQDNSDYRSEESRRIQCTKCGNSHIWDCCQFHQAKDGDGWVEYKGSLAFERAQKGMACRPNTHRPSFHVNMVGLEKSPRCNSSRYPWDLDAEMMLDEDEEAFELWLQQALDAGLFCETSKRRKSWSFGCAPTAPSDSYSQPWHFTLLDIIAATAYLQKDPMSSAEDNKEQGQMDANTSNESMPSTKQQEEVIKKKYGGLLPKKQPLISKDHERAYFDSADWALGKQGGEKPKGPLEALRPKLQPTQQQTRYRKSFCAPSGEEGGSVSSEDAPSNEILVLFGPCFTQRFPSEVVRNEALEETEECYGLFNTSPSPLLLPPLPDAQVAAPAHSTIIHLYNTVLYTFFSLLSSQCHKMSGILEQTNVFKSLLVGCLECRIWYRWRSCKADLNLDHFNIRVIEPVGFGSFRKVYRCHELNSNRVVAVKEVFVADEEEEVVINDRIEFLKDCPHENVVRLLHTLKRGCYLYLVFEYIHPNLYYFMNLPDHNKYPNQRNILAAVAHYHSHGLLLRDLKTQNLLMDFHDGYLKLGDFGLYGAFGDPQPRDIPVSEYTAPEVLLNSNQHSPAADVWAVGCIFGEIVTGKLIFYTGKTNQEQLRSIFSLLGAPTEESWPGISDLCPTLCFYPKFEPQDLSSKFPDLEPEGIDILSAADMWSVGCIFGDMIAGKPTAMLIRCGIWYPWWYEPPPAKLQDYKIIGEDAVYNHYGKLLKMFHQILSAVAHYHNCEIVIGDIKPKYLQMKCNMEIKLADFGFAGSFGDPWITYPV 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0798 1230 Gene3D Transferase(Phosphotransferase) domain 1 1170 1229 - -
Lele12g0798 1230 CDD DnaJ 383 439 IPR001623 -
Lele12g0798 1230 ProSitePatterns Nt-dnaJ domain signature. 427 446 IPR018253 -
Lele12g0798 1230 ProSiteProfiles Protein kinase domain profile. 863 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0798 1230 SUPERFAMILY Protein kinase-like (PK-like) 1172 1224 IPR011009 -
Lele12g0798 1230 ProSiteProfiles dnaJ domain profile. 383 450 IPR001623 -
Lele12g0798 1230 MobiDBLite consensus disorder prediction 711 738 - -
Lele12g0798 1230 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 651 720 IPR006760 -
Lele12g0798 1230 MobiDBLite consensus disorder prediction 634 654 - -
Lele12g0798 1230 SMART serkin_6 863 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0798 1230 SMART dnaj_3 382 442 IPR001623 -
Lele12g0798 1230 SUPERFAMILY Chaperone J-domain 358 446 IPR036869 -
Lele12g0798 1230 Pfam Protein kinase domain 865 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0798 1230 PRINTS DnaJ domain signature 405 420 IPR001623 -
Lele12g0798 1230 PRINTS DnaJ domain signature 422 442 IPR001623 -
Lele12g0798 1230 Gene3D DnaJ domain 369 470 IPR036869 -
Lele12g0798 1230 MobiDBLite consensus disorder prediction 628 657 - -
Lele12g0798 1230 Gene3D Transferase(Phosphotransferase) domain 1 959 1116 - -
Lele12g0798 1230 Gene3D Phosphorylase Kinase; domain 1 859 940 - -
Lele12g0798 1230 Pfam DnaJ domain 383 447 IPR001623 -
Lele12g0798 1230 PANTHER OS03G0832900 PROTEIN 523 589 - -
Lele12g0798 1230 SUPERFAMILY Protein kinase-like (PK-like) 862 1090 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0798 Lele-ChrLele12 16026658 16052728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0798 94 594 Miscellaneous Gene Families AT1G16680 64.022 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele12g0798 Pkinase 8.9e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0516 09 3838322 3844043 Lele12g0798 12 16026658 16052728 hybridization
Lele10g0481 10 3410514 3416411 Lele12g0798 12 16026658 16052728 hybridization