Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0797 ATGATAAAATCTTCCAAATATAGTGCTCCTGAAATTCTTTTTGGATCACGTCGATATTCAAAGGCAGCTGATATGTGGTCTGTGGGTTGTATATTTGGAGAAATGATAACTGGGAACCCTATATTTCAAGGCAAATCTCAAAATGACCAATTAAAGTCAATTTTTCGTTTGTTAGGTACCCCAACTGAGGAATCCTGGCCTGGAGTGACAGAGATATGTAGTCGTAGAACACTTTCGAGCTTTTCCAAATTTGAACGAATGAACCTGCTGGCAGTGAAGTTATTTGGTTTTGAACCCCAAGGCATTGATCTTCTTTCCAAAATACTTTGCCTGGATCCTTGCAGAAGAATTTCAGCTGCTAATGCTCTTAAACATGATTACTTCAAAGGTTTCAATCAGAGGCAAAGGTTGACTCGCATTCTTGTATTCATTTTCTGGAGAAGCAAACCGGACGTTGATCTAGAGGAACTCCACTGCAAGGTTCTTGGTCAGTTTGATCTGCTTTCTTTCATTAGTCTATCAAATCATCGCAAGAAGCAACTGCAAATAAATGAGCTAACACCTATTAAGTACCGCGCACCTGAACTCTTACTTGGATTGGCTGAAGATACAACGGAGGCTGATATGTGGTCTGTGGGCTGTATATTTGGAGAGATGCTAACTGGGCAGACTTTATTTGCAGTAAAAGCAAAGAAGATCAGTTGA 705 0.4 MIKSSKYSAPEILFGSRRYSKAADMWSVGCIFGEMITGNPIFQGKSQNDQLKSIFRLLGTPTEESWPGVTEICSRRTLSSFSKFERMNLLAVKLFGFEPQGIDLLSKILCLDPCRRISAANALKHDYFKGFNQRQRLTRILVFIFWRSKPDVDLEELHCKVLGQFDLLSFISLSNHRKKQLQINELTPIKYRAPELLLGLAEDTTEADMWSVGCIFGEMLTGQTLFAVKAKKIS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0797 234 Gene3D Transferase(Phosphotransferase) domain 1 183 230 - -
Lele12g0797 234 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0797 234 Gene3D Transferase(Phosphotransferase) domain 1 5 136 - -
Lele12g0797 234 PANTHER CELL DIVISION PROTEIN KINASE 188 229 - -
Lele12g0797 234 SUPERFAMILY Protein kinase-like (PK-like) 181 227 IPR011009 -
Lele12g0797 234 SUPERFAMILY Protein kinase-like (PK-like) 4 132 IPR011009 -
Lele12g0797 234 SMART serkin_6 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0797 234 Pfam Protein kinase domain 188 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0797 234 Pfam Protein kinase domain 4 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0797 Lele-ChrLele12 16011984 16016303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0797 184 226 Core Cell Cycle Gene Families AT3G48750 51.163 1.03e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele12g0797 Pkinase 3.2e-22 CL0016