Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0796 ATGAGTAATCCCCGTCAAAATTCCTCCGTATTCATGTCTCTGTTGATTCGCTTTCTTGAATGCAGATTTTGGAATCCTTGGAGGAGCAAACCGGACCTTGATCTAAAGGAGTTCAACTTCATGGTTTTTCATCAGATTGGAGACGCTGATTTCAATTTGGCCAGTGAATTGGAAGCTTCTGAGCAATATTTTACTGTAATAACACCTATCGAGTACCGCGCACCTGAACTTTTACTTGGATGGAATGACTATTCAATGGCGGCTGATATGTGGTCTGTGGGTTGTATATTTGGTGAAATGCTAATCGGGCAGACTTTATTTCGAGGTATAAGCGAAGAAGATCAATTGAGAAGGATTTTTGGCTTGTTAGGTACTCCAACGGAAGATTCCTGGCCTGGAGTAACTGCACTATTTAGTTCAATTTCATCCTTTCCCATATTTGAACGAATGGATTTGGCAGCAAAGTTCCCCGGTCTGAACCCAGATGGCCTTGATCTTCTTTCCAGAATGCTTTGTCTGGACCCAGACCGAAGGATTTCAGCTGAAGATGCTCTGAACCATCCATTTATGATCCATACATTCACGGTGGCGAATGAGGCAAGGAAGGAATACTTGAGATTATTTGAGGCTAGCTATTCAAATGTCCCCAAGATTAATCACTTCGCTGTTCAATTTGGAGGACATGATGGTACAATACTCTCTTCATACTTGATAGCAGAGTTCTTACAACCAGAAAACCATGGGGACCTTGCACTCTGTAATCCTCAGGATTAA 774 0.4212 MSNPRQNSSVFMSLLIRFLECRFWNPWRSKPDLDLKEFNFMVFHQIGDADFNLASELEASEQYFTVITPIEYRAPELLLGWNDYSMAADMWSVGCIFGEMLIGQTLFRGISEEDQLRRIFGLLGTPTEDSWPGVTALFSSISSFPIFERMDLAAKFPGLNPDGLDLLSRMLCLDPDRRISAEDALNHPFMIHTFTVANEARKEYLRLFEASYSNVPKINHFAVQFGGHDGTILSSYLIAEFLQPENHGDLALCNPQD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0796 257 SMART serkin_6 6 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0796 257 Gene3D Transferase(Phosphotransferase) domain 1 33 212 - -
Lele12g0796 257 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0796 257 Pfam Protein kinase domain 34 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0796 257 SUPERFAMILY Protein kinase-like (PK-like) 49 193 IPR011009 -
Lele12g0796 257 PANTHER CELL DIVISION PROTEIN KINASE 34 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0796 Lele-ChrLele12 16004614 16008310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0796 34 189 Core Cell Cycle Gene Families AT3G48750 46.875 2.85e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele12g0796 Pkinase 4e-25 CL0016