Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0791 ATGGAAGACTATACCTTTTTCCCTCCTGATGCAGATCTCGACCTCAGCTTCACCAGCACCACCTCCGCCGCCACTGATCGGACCTTTGCTTCTTCCAGTGCTCGGACCAGCTTGGCTCGCAGCAGTTTGACTCTCAGCTTCAACGAACGTCTATCCACTGCCTCTGCTGCTACCGCCAGAACTTCCTCTTCCACGCTATTCCTCCGACCGCATCGGGCATCCGATCCTCATTGGTCAGCCATCAAAGCTGCCACCACTCTCTCATCTGACGGCGCCCTCCACCTCCACCACCTCAAGCTCCTCCGCCACCTCGGCACTGGGAATCTCGGGCGAGTATTCCTCTGTCGTCTTCGTGATTATGATCACGCAAACTTTGCTCTCAAGGTTGTTGATAAGGACTTGCTAAGCAGCAAGAAGCGCTCTCATGTGCAAATGGAGGGTGAGATCCTGTCCATGCTGGACCATCCTTTTCTTCCTACTCTCTACGCGCGATTGGAGGTATCGCATTACTCATGTCTGTTGATCGATTACTGCCCCGGCGGCGACCTCCACTCTCTCCTACGTAAACAGGCCGGAAACCGGCTACCGGTTCAGGCGGTCCGGTTCTTCGCGGCGGAGATACTGGTAGCGTTGGAATATTTGCATGCACTTGGCATCGTGTATAGGGATCTGAAACCAGAGAACGTTCTATTGCGAGAAGACGGCCACGTCATGCTGTCCGACTTCGATTTGTGCTTCAAGGCCGACGTGGTCCCCTCATTCGAGTGTCGTACAGGGCCCACTAAGAGGAAGAACCGGGTGTGGAATTGTTTCAGAGGCGTCAGAGCTAGATCATCGCCGGAGCAACTCGTGGAAACGGAGTTCGTGGCGGAGCCAAGCGCGGCTTTCTCGAGGTCCTGCGTTGGGACGCACGAGTACTTGGCGCCGGAGTTGGTCTCCGGGAACGGGCACGGAAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATCTACGAGTTGTTGTACGGGACGACGCCGTTTAAAGGGTGGAGCAACGAGAGCACACTGCGCAATATAGCATCAAGTCGAAACGTGAGCTTCCACGTGGGGGAAGGAGAGGAAGAGGGAATGGCGGAAGCCAGGGATTTGATAGAGAAACTGTTGGTGAAGGACCCAAGGAGAAGGCTAGGATGCTCCAGGGGTGCGACGGATATTAAACAACACACGTTTTTTGGCGGGATCAAGTGGCCGCTGATCCGAACCTACCGGCCACCGGAGGTTCGGGGGCTAATGATCAAGAAGGGGAGGTCACACGTGAGCAGTCACGTGACACATAGGAGAAGACGGTGGTGGTGGAAGGGGCTTGACTATGTTCTTAATAAGAGAAATAACAAGGGATATAGTAAGTATAACTTAATCTCAAACTATAGCAACGGTAATTATTATCGTTACGTTAATAGTAATAATAAGGCTAGGAAATGTGCTTGA 1467 0.5351 MEDYTFFPPDADLDLSFTSTTSAATDRTFASSSARTSLARSSLTLSFNERLSTASAATARTSSSTLFLRPHRASDPHWSAIKAATTLSSDGALHLHHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKRSHVQMEGEILSMLDHPFLPTLYARLEVSHYSCLLIDYCPGGDLHSLLRKQAGNRLPVQAVRFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVVPSFECRTGPTKRKNRVWNCFRGVRARSSPEQLVETEFVAEPSAAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSNESTLRNIASSRNVSFHVGEGEEEGMAEARDLIEKLLVKDPRRRLGCSRGATDIKQHTFFGGIKWPLIRTYRPPEVRGLMIKKGRSHVSSHVTHRRRRWWWKGLDYVLNKRNNKGYSKYNLISNYSNGNYYRYVNSNNKARKCA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0791 488 ProSiteProfiles Protein kinase domain profile. 98 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0791 488 Gene3D Transferase(Phosphotransferase) domain 1 297 414 - -
Lele12g0791 488 PANTHER FLIPPASE KINASE 1-RELATED 36 422 - -
Lele12g0791 488 Gene3D Phosphorylase Kinase; domain 1 97 177 - -
Lele12g0791 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele12g0791 488 Pfam Protein kinase domain 100 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0791 488 FunFam Serine/threonine-protein kinase OXI1 182 250 - -
Lele12g0791 488 FunFam Serine/threonine-protein kinase OXI1 295 422 - -
Lele12g0791 488 SMART serkin_6 98 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0791 488 SUPERFAMILY Protein kinase-like (PK-like) 78 421 IPR011009 -
Lele12g0791 488 Gene3D Transferase(Phosphotransferase) domain 1 178 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0791 Lele-ChrLele12 15962453 15963919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0791 1 486 AGC Kinase Gene Family AT3G14370 64.257 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele12g0791 Pkinase 2.1e-54 CL0016