Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0790 ATGGCGATAGGTTGCTTGATGCTAATAGTTTTTTTTGGCATCGTCCTTGTAAGTTCTATTAATGAAGATGGTTCAAATCTTTTGAAGTTCAAAGCTTCTCTTGTCGACCCACAAAATTCTCTTCACAACTGGAATTCTTCTGATTTTACTCCTTGCAATTGGAAAGGTGTGCATTGTGATGATTCAATGGTAACTTCAATAAATCTTCATCAGCTCAATCTGTCTGGTGCTTTGTCTCCTAGCATCTGTAACCTTCCACAGCTAGTTGAGTTGAATGTGTCAAAAAATTTCATTTCTGGTCCTATTCCTGTGGGTTTTGTTAACTGTCGAAGTTTAGAGATATTAGACCTTTGCACGAATAGGTTCCATGGAGAAATTTTGATTCCTTTCAGCAAAATCACCACGCTAAGAAAGCTTTACCTCTGTGAAAATTATATGCATGGTGAAGTGCCTGAAGAGATTGGGAATTTAACTTCACTTGAAGAGCTAGTCATTTATACCAACAACTTAACTGGAAGAATTCCCGCATCAATCAGCAAGTTGAAGAAGCTTAAAATCATCAGGGCAGGTGTTAATAGCATCTCAGGTCCAATACCGTCGGAAATAAGCCAGTGTGAGAGCTTGCAGATATTAGGATTTTCTCAGAATCTTCTAGAAGGATCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACTGAGTTAAATCTATGGCAAAACTATTTATCTGGTGAGATTCCTCCTGAGATTGGAAATTTGAGTAGCCTGCAATCGCTTGCTTTGCATCATAATTCATTTGGTGGAGCTCTCCCCAAGGAGCTTGGAAATTTATCAAATTTACAAAGGTTGTACATATACACTAACCGCTTGGATGGCTCAATTCCGGTGGAGCTAGGGAACTGCACAAATGCTGTTGAGATAGATCTGTCTGAAAACCGTTTAAGTGGAAATATTCCAAAAGAGTTAGGTCAGATCTCTGGTCTTAGATTGCTTCATCTATTTGAAAACTTTCTTCTGGGAGAGATACCTCAGGAGCTTGGGAAGTTAAAGCTGTTAAAGAATTTAGACCTGTCTATAAATAACTTAGCAGGTACAATTCCACTAGTGTTTGAAAATCTTACATACATGGAGGATTTGCAGCTATTTGATAATCAACTTGAGGGTAAAATTCCTCCTTATCTTGGATCTAATAGCAACCTTACAGTTCTTGATATATCTACAAATAATCTTGTTGGTACGATACCTCCCCATCTTTGCCGCAATCAGAAATTGCAGTTCCTGAGCCTTGGGTCAAATAAGTTGCTTGGCAATATTCCACATGACCTGAAAATGTGCAAGCCTCTTGTGCAGCTAATGCTGGGAGACAACCAACTGACAGGAAGCTTCCCTGTTGAATTATATGAACTTCATAATCTTTCTGCTCTTGAACTTAATCAGAACCGATTCTCGGGACTAATCGATCATGGGATAGGTCGACTAAAGAATTTAAGGAGGCTCCTCTTATCAGATAATTATTTTCTAGGTTATCTTCCTCCTGAGGTTGGGAATTTAGCACAGCTTGTCTCATTCAACATTTCCTCTAATTTTCTCAGTGGAAATATACCTCATGAGTTGGGAAACTGCATAAAACTCCAGAGGCTTGATCTGAGTAGAAATGAGTTCACTGGTGATCTTCCAGATGATATTGGCAAGTTGGTTAATCTGGAGCTGTTGAAACTTTCAGATAATAGACTATCTGGAACAATACCAAGTGCTTTAGGGGACCTTAAACGTCTCACAGATTTGGAACTGGGGGGTAACTTATTTGTTGGGAGCATTCCTTTTCATTTAGGACAATTAGCTGCTCTTCAGATTGCTCTTAACTTGAGTTACAACAAACTTTCTGGTACAATTCCTGACAGCCTTGGGAGCTTGCAAATGTTGGAAAATCTTTATTTAAATGACAATCAGCTTGTTGGTGAAATTCCTGCTTCAATTGGTGACCTTCCCAGCCTCATAGTGTGCAATGTTTCCAACAATAAACTTGCAGGGCTCATTCCAGACACACCGGCATTTCGGAAGATGAATTTTACAAATTTTGCTGGAAACAATGGGTTGTGTCGAGTAGGTTCATATTATTGTCATCCATCTCATATTCCAAGCTGGACCGGAGATGGTTCATCAAAACAAAAGATAGTGAGCATTGTTTCTGCGGTGGTGGGATTTGTTTCTCTTATTTTCATAGTCTGTATATGTTGGGCCATGAAACGCCGTAGCTCTTCTTTTGTCTCAATCGAAGGGCAATCGAAGCCAAATGTCCTAGATAACTATTACTTTCCCAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTAGCAATTTTTCAGAAGCGTTAGTTATAGGAAGAGGAGCTTGTGGAACCGTCTACAAGGCTGTTCTGACTGATGGTGATTTGATAGCTGTCAAGAAGTTGAATTCTCGTGGAGAAGTAGCAAATGTGGACAGAAGTTTCCTTGCAGAAATTTCAACTCTGGGAAAGATCAGGCACAGAAATATTGTGAAGCTGTTTGGATTCTGTTGTCATGAGGATTCTAACATTCTCTTGTATGAATACATGGCAAATGGCAGCCTTGGTGAACAACTTCATTCAGATCCAGACGTGTGTATATTGGGTTGGAGTAGTCGCTACAAAATTGCTCTTGGAGCAGCAGAAGGCTTGTGCTATCTTCATTATGATTGTAAACCTCAAATCATCCATCGCGATATAAAGTCAAACAATATATTGCTTGATGAAGCGTATCAGGCTCATGTTGGAGACTTTGGCCTGGCTAAGTTGGTGGACTTTTCCTACTCCAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATATATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAGCAGGGTGGTGATCTAGTTACTTGGGTGAGAAGATCGATTCAAGCATCAGTACCGACATCTGAATTGTTTGACAAAAGATTAAATCTGAGTGCACAAAAAACAATCGACGAGATGTCTCTTGTTCTCAAAATTGCTCTGTTTTGCACCAGTACATCCCCACTTAATAGGCCAACAATGAAAGAGGTCATCGCGATGTTGATTGATGCTAGAGAGTATGTCAACAATTCTCCATTGACTCCTACATCTGAATCCCCACTAAATGAAGATGCTTCTTCCAAAGGTTCGATCAGCTTATTTTCTGTCAATGATAGTGATGGATATATCTTTCACTCAATTCCATGGAACTTGGAAGTAATTATATATGTAGCCATAAAGAAGCAAAGCTTTTTGCTTTTAACTCAACCAGATGTTCCTCCACTGTTTTCTGCAGCATTAGGCACACTTTTCAGTTAA 3441 0.3978 MAIGCLMLIVFFGIVLVSSINEDGSNLLKFKASLVDPQNSLHNWNSSDFTPCNWKGVHCDDSMVTSINLHQLNLSGALSPSICNLPQLVELNVSKNFISGPIPVGFVNCRSLEILDLCTNRFHGEILIPFSKITTLRKLYLCENYMHGEVPEEIGNLTSLEELVIYTNNLTGRIPASISKLKKLKIIRAGVNSISGPIPSEISQCESLQILGFSQNLLEGSIPRELQKLQNLTELNLWQNYLSGEIPPEIGNLSSLQSLALHHNSFGGALPKELGNLSNLQRLYIYTNRLDGSIPVELGNCTNAVEIDLSENRLSGNIPKELGQISGLRLLHLFENFLLGEIPQELGKLKLLKNLDLSINNLAGTIPLVFENLTYMEDLQLFDNQLEGKIPPYLGSNSNLTVLDISTNNLVGTIPPHLCRNQKLQFLSLGSNKLLGNIPHDLKMCKPLVQLMLGDNQLTGSFPVELYELHNLSALELNQNRFSGLIDHGIGRLKNLRRLLLSDNYFLGYLPPEVGNLAQLVSFNISSNFLSGNIPHELGNCIKLQRLDLSRNEFTGDLPDDIGKLVNLELLKLSDNRLSGTIPSALGDLKRLTDLELGGNLFVGSIPFHLGQLAALQIALNLSYNKLSGTIPDSLGSLQMLENLYLNDNQLVGEIPASIGDLPSLIVCNVSNNKLAGLIPDTPAFRKMNFTNFAGNNGLCRVGSYYCHPSHIPSWTGDGSSKQKIVSIVSAVVGFVSLIFIVCICWAMKRRSSSFVSIEGQSKPNVLDNYYFPKEGFTYQDLLEATSNFSEALVIGRGACGTVYKAVLTDGDLIAVKKLNSRGEVANVDRSFLAEISTLGKIRHRNIVKLFGFCCHEDSNILLYEYMANGSLGEQLHSDPDVCILGWSSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEAYQAHVGDFGLAKLVDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPTSELFDKRLNLSAQKTIDEMSLVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVNNSPLTPTSESPLNEDASSKGSISLFSVNDSDGYIFHSIPWNLEVIIYVAIKKQSFLLLTQPDVPPLFSAALGTLFS 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0790 1146 FunFam Predicted protein 175 271 - -
Lele12g0790 1146 Pfam Protein kinase domain 794 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0790 1146 Gene3D Ribonuclease Inhibitor 392 711 IPR032675 -
Lele12g0790 1146 Gene3D Ribonuclease Inhibitor 306 391 IPR032675 -
Lele12g0790 1146 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 272 366 - -
Lele12g0790 1146 Pfam Leucine rich repeat 543 601 IPR001611 GO:0005515
Lele12g0790 1146 SUPERFAMILY L domain-like 22 300 - -
Lele12g0790 1146 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Lele12g0790 1146 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 867 1079 - -
Lele12g0790 1146 SMART LRR_typ_2 638 662 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 277 301 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 157 181 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 565 589 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 398 421 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 469 492 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 493 517 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 229 253 IPR003591 -
Lele12g0790 1146 SMART LRR_typ_2 349 372 IPR003591 -
Lele12g0790 1146 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 753 866 - -
Lele12g0790 1146 Gene3D Ribonuclease Inhibitor 72 228 IPR032675 -
Lele12g0790 1146 Gene3D Ribonuclease Inhibitor 15 71 IPR032675 -
Lele12g0790 1146 ProSiteProfiles Protein kinase domain profile. 789 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0790 1146 SUPERFAMILY Protein kinase-like (PK-like) 766 1062 IPR011009 -
Lele12g0790 1146 Gene3D Phosphorylase Kinase; domain 1 752 866 - -
Lele12g0790 1146 SUPERFAMILY L domain-like 300 409 - -
Lele12g0790 1146 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 370 1063 - -
Lele12g0790 1146 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 174 - -
Lele12g0790 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Lele12g0790 1146 SUPERFAMILY L domain-like 370 719 - -
Lele12g0790 1146 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 397 711 - -
Lele12g0790 1146 Gene3D Ribonuclease Inhibitor 229 303 IPR032675 -
Lele12g0790 1146 Gene3D Transferase(Phosphotransferase) domain 1 867 1079 - -
Lele12g0790 1146 SMART serkin_6 789 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0790 Lele-ChrLele12 15954145 15958228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0790 14 1067 Receptor kinase-like Gene Family AT1G73080 39.585 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele12g0790 Pkinase 1.9e-45 CL0016