Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0788 ATGGCGGAAGAAGAGGTAGTGTTATTGGATGAGTGGCTGAGCATGTGGGAGATGTTGGGGGAAGGATATGGGGAGGGAAGAAAGAAGAAAGAAGAAAGAGAAGAGGCAAAGAAGGAGATGATAGAGAGCTTGAAGCAATTGGAAGAGACCCTTGGAGACAAAACTTTCTTTGGAGGTGAAAGCTTTGGGTTTGTGGACATTGCTCTGATTCCATTCTATGTCTGGTTTTACACTTACGAGGAATTATGCAACTTCGAGGTGCAAAAACATTGTCCAAAGCTCATTGCCTGGGCTCACACATGCCTCCAGAGGCAGAGTTTTTCCAAATCTCTTGCTGCTGAGAAGGAGATCTTCGATTTCGTTGTTGACTACAGAAAGAAAAATCAATTGGACTGA 396 0.4394 MAEEEVVLLDEWLSMWEMLGEGYGEGRKKKEEREEAKKEMIESLKQLEETLGDKTFFGGESFGFVDIALIPFYVWFYTYEELCNFEVQKHCPKLIAWAHTCLQRQSFSKSLAAEKEIFDFVVDYRKKNQLD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0788 131 Coils Coil 27 50 - -
Lele12g0788 131 CDD GST_C_Tau 40 124 IPR045074 GO:0004364|GO:0006749
Lele12g0788 131 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 130 IPR010987 -
Lele12g0788 131 Gene3D - 7 131 - -
Lele12g0788 131 Pfam Glutathione S-transferase, C-terminal domain 27 104 IPR004046 -
Lele12g0788 131 SUPERFAMILY GST C-terminal domain-like 25 127 IPR036282 -
Lele12g0788 131 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 29 112 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0788 Lele-ChrLele12 15924775 15925516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0788 29 127 Glutathione S-transferase Gene Family AT1G17180 56.566 9.56e-34 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0527 09 3913419 3914194 Lele12g0788 12 15924775 15925516 hybridization
Lele10g0490 10 3509565 3509894 Lele12g0788 12 15924775 15925516 hybridization