Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0786 ATGGCGGATGAAGTGATTCTCCTGGATTTCTGGCCAAGCCCATTTGGGATGAGGGTTCGAATCGCTCTGGCAGAGAAGGGAATAGACTACGAAGGAAGAGAAGAAGACTTGAGCAACAAGAGCCCTCTGCTTCTAAAGATGAACCCTATTCATAAACAAATCCCAGTTCTGATTCACAACAGCAAACCCATCTCTGAATCTCTCGTCATTCTTCAATACATCGACGAGGTTTGGAATCAAAACAAGAATAAATTGCTTCCCTCTGATCCCTACCAGCGGGCCAATGCCAGATTCTGGGCCGACTACATCGACAAGAAGATATATTTGACTGGGAGATTGGTGTGGGCAACTACAGGGGAGGTACAAGAAAGAGCCAAGAATGAACTGAGAGAATGCTTCAAGCTATTGGAAGCAGAATTAGGGAACAAGAGTTTCTTTGGTGATGACACGTTTGGTTTGGTGGACGTGGCTCTGATTCCATTTTACAGCTGGTTCTTCACGCTTGAAAGTGCCGGAAACTTCAGCATCGCCGACGAGTTTCCCGGGCTGGTGGCCTGGGCCAAGAGGTGCATGCAGAGGGAGAGTGTGGCCAAATCTGTGCCTGACCAGTACAAAGTTTATGACTTCCTCTTAGACCTGAAGAAGAAGCTTCAACCTCAGCTTCAGCAGCAACGCTGA 678 0.4764 MADEVILLDFWPSPFGMRVRIALAEKGIDYEGREEDLSNKSPLLLKMNPIHKQIPVLIHNSKPISESLVILQYIDEVWNQNKNKLLPSDPYQRANARFWADYIDKKIYLTGRLVWATTGEVQERAKNELRECFKLLEAELGNKSFFGDDTFGLVDVALIPFYSWFFTLESAGNFSIADEFPGLVAWAKRCMQRESVAKSVPDQYKVYDFLLDLKKKLQPQLQQQR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0786 225 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Lele12g0786 225 SFLD Main (cytGST) 2 219 - -
Lele12g0786 225 Pfam Glutathione S-transferase, C-terminal domain 120 194 IPR004046 -
Lele12g0786 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Lele12g0786 225 Gene3D - 89 219 - -
Lele12g0786 225 CDD GST_N_Tau 5 78 - -
Lele12g0786 225 FunFam Tau class glutathione S-transferase 1 86 - -
Lele12g0786 225 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Lele12g0786 225 FunFam Glutathione S-transferase U20 89 220 - -
Lele12g0786 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lele12g0786 225 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Lele12g0786 225 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Lele12g0786 225 Gene3D Glutaredoxin 1 88 - -
Lele12g0786 225 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Lele12g0786 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0786 Lele-ChrLele12 15917934 15918703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0786 1 220 Glutathione S-transferase Gene Family AT1G78380 64.091 3.30e-102 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0535 09 3993918 3995769 Lele12g0786 12 15917934 15918703 hybridization
Lele10g0493 10 3516759 3518201 Lele12g0786 12 15917934 15918703 hybridization