Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0780 ATGGCCAACACAACCAATAGCATGGTGCTTTATAGTGGATCCATGTTGGCCCATGCACATATAAATTGTCTCCTGAAACCTGCAAGATTACTCCTGAGATTTCAATCATCGTCTGCAACTTTGGCTGTTACGAATGGGGCATCGCACGTCTCCTTAGGAAAGTTGAGGCACAAGTGGAAAAGACAGTTTGTTAGGACCTGCTCGACCAGCGAGTTTGTTATTGCTGATGATGAAAAATATGGCAATAAGCAGGTCGTCAGTCTCAGTCCCCGCCTTTATGACTATGTCCTGAAGAACGTTCGAGAATCAGAGATTTTGAGACAATTGCGTGAGGAGACGTCCTCTATGCGTGGAAGCCAGATGCAGGTGTCTCCAGATCAGGCACAACTACTTGCAATGCTTGTGCAAATTCTTGGAGCAGAACGTTGTATTGAAGTTGGTGTTTATACTGGATACTCATCTTTGGCCATAGCTTTAGTCCTACCAGAATCTGGTTGCTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGAGGTTGCCAAGAAATATTACCAGCTAGCTGGTGTTTCGCACAAGGTTGATGTAAAATTTGGACTCGCCGCAGATACCCTAGAATCTTTGATTTTAGATGGTGAAGCTGGCAGCTATGATTTTGCATTTATTGATGCTGATAAAAGGATGACTCAGAAATATTTTGAACTGCTGCTGCAGCTGGTGAGAGTTGGAGGTATCATTGTAATTGACAATGTTCTGTGGCGTGGAAAAGTTGCTGACCCTCTGATAAATGACCCTAAAACTATCAGCATTAGAAACTTTAATCAACAGTTGGTCGAGGACAAGCGTGTAAACATCAGTATGGTAGGTGCCAATCGGAGATGGAATAACAATCTGCCAAAAAAGATGACTTAA 909 0.4301 MANTTNSMVLYSGSMLAHAHINCLLKPARLLLRFQSSSATLAVTNGASHVSLGKLRHKWKRQFVRTCSTSEFVIADDEKYGNKQVVSLSPRLYDYVLKNVRESEILRQLREETSSMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGCLVACERDAKSLEVAKKYYQLAGVSHKVDVKFGLAADTLESLILDGEAGSYDFAFIDADKRMTQKYFELLLQLVRVGGIIVIDNVLWRGKVADPLINDPKTISIRNFNQQLVEDKRVNISMVGANRRWNNNLPKKMT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0780 302 PANTHER O-METHYLTRANSFERASE-RELATED 82 287 - -
Lele12g0780 302 Pfam O-methyltransferase 100 287 IPR002935 GO:0008171
Lele12g0780 302 Gene3D Vaccinia Virus protein VP39 74 290 IPR029063 -
Lele12g0780 302 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 286 IPR029063 -
Lele12g0780 302 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 82 302 IPR002935 GO:0008171
Lele12g0780 302 CDD AdoMet_MTases 142 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0780 Lele-ChrLele12 15897913 15900131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0780 58 301 Monolignol Biosynthesis Gene Families AT3G62000 73.684 1.67e-139 396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0541 09 4045252 4047293 Lele12g0780 12 15897913 15900131 hybridization
Lele10g0499 10 3542680 3544877 Lele12g0780 12 15897913 15900131 hybridization