Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0735 ATGAGGTTGGCTTGGTTAATCTTCATCCTTTCCCTCCTCACAGTTTGGTCCACATCTTTTGCTTCTGCAACAAATTTACCAGACGATGAAGTGAAAGCAATGAAAGATATGGCGAAGGTGTTGGGGAAGAAGGATTGGGACTTCAAGGTAGATCCCTGCAGTGGAGAAAATGGATGGGTTAAGCCAAATCCTGTTCAGGGCGATGAAAACAATGTCACTTGCGTTTGCTCTTCTTCTGTCAGCGATAATAATGCCACAGTCTGCCACGTCACCAACGTAGTCCTGAAAGGACAAAATCTTCAAGGCACGCTCCCTCGTGAACTGGTCAGGTTGCCCTATCTTCAAGAAATTGATCTCTCTCGCAATTACCTGAACGGCACAATCCCTAAAGAATGGGGCTCCTTGAATCATCTTGTCAACATTTCCCTAATTGGAAATCGATTGACGGGCCCAATCCCAGCAGAGCTTGGAAATCTCACCAGTCTCAGAAGCATGGTTTTGGAGTTCAATCAATTATCTGGACATTTACCGCCGGAGCTTGGGAATCTTTCTCAGATTCAAAGGCTGTTTCTTACTTCCAACAATTTTTCTGGGGAATTACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTTCTGGAAAGATACCCAGTTTTATTGGGAGCTGGACGAGTCTAGTGAAACTAGTGATCCAAGGGAGTGGTTTGAGAGGGCCAATTCCCTCAGAAATTTCGTTTCTGCATAACATGACTGACTTGAGAATTAGTGACTTGAATGGACCTGATTCCTCTTTTCCACAACTTGCTAGGATGACAGGATTGAAGAGTCTGGTATTAAGGAGTTGCAATATCACTGGAACATTACCTGAATATCTTGGAACAATGACCAGTATAAAATCCTTAGATCTCAGCTTTAACGAATTAACTGGACAAATTCCAAGCACCTATACTGGCTTAAGAAAAGCAGAATACATATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAACGTTCCGGCTTTGTAGATCTTTCATACAACAACTTCAGCATTGGAAACCCAGGGCAGCCAACATGTGAAAGGGGCAATGTGAACCTGTTTTCAAGCGCTTTGACAGGAAATAACTCGGGAACAGTTCCATGTTTGATAGGCTTTCGCTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGTGGCCAGAAATTAACAGTAAACGGAAGTACAATTTTTGAAGAAGATTCAGATGGATCCGGATCAGCAACATTTTACCGGAGTGACACAAATTGGATATTGAGCAGCACTGGTTACTTCTTTGATAAAGAACGCACAGATTACTATACCGTGCAAAGTGCATCTTCACTCTCTATAACCAATGCTAAATTATACATGGCCGCACGTGTTTCTCCACTCTCTCTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGATGATCAAACATATAGCAGCCTTGGAAGGCGTGTATTTGATGCCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAGTCATCAAAGAATTCACCGGTATTGTGACTAGGAATTCATTGGAGATCCGTCTCTATTGGGCTGGGAAAGGGACAACTGCTATTCCGTATAAATCACTATATGGTCCACTTATATCAGCTATATCTGTGGAACCTGACTTTAAATCTCCATTGGAAAATGGAAGTAGCATATCTGGAGGGACTGTTGTTGGCATTGTGGTTTCTGGAGCAATTATTGTAATCCTGGTATTTGGTACACTTTGGTGGAGAGGCAATCTAGGACCCAAAAATTCATTGGCAAGAGAGCTGAAGAATTTAAATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCAGCGACAAACAACTTTGATGTTGCTAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGCTTTCTGTCAGATGGGACCATAATAGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAATCGGGAGTTTATAAATGAGATAGGCATGATTTCTGCTATGCAACATCCTTGTCTTGTTAAACTTCATGGCTGTTGTGTTGAGATAGATCAATTGTTGCTGGTATATGAATACATGGAGAACAATAGTCTCGCCCGTGCTTTATTTGGCCAAGAAGGTCGATTACATTTAGACTGGCCGACTAGATACCGGATATGTATCGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGATTGAAGATCGTTCATAGGGATATTAAAGCCACCAATGTGTTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTTATGAAGAAGACAACACCCATGTCAGCACTAGAATAGTTGGGACATATGGATATATGCCTCCTGAATATGCAATGCATGGTCATCTGAGCGACAAAGTAGATGTCTATAGTTTTGGCATTGTTGCATTGGAAGTTGTAAGCGGGAGGAGCAACAACATGGACAATAGCCTCTATCTTCTGGAGTGGGCACATTTCTTAAAAGAAAACAACAATCTAATGGAGATAGTTGATCCAAGGTTGAAATTGAAGTTTATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTCTTATGCACAAATGTGAGCGCATCACTTAGGCCCAGCATGTCTTCTGTGGTAAGCATGCTTGAAGACAGAACTGTTAGGAAGGTGGTTCCAGATGCAAGTGAGGCATCGGATGGGATGAAGAGGATGCAGAAGTATTACCAAAATATTGGGAAAAATAGCATATCAACAATGGAGGAGGTGTCAAGTATTGATTCACCTACATCAGTTTCTGATCTCTATCCTGTTCACTTGGATTCCTCTTATTGGATGCAAAGAAATTAG 2994 0.4145 MRLAWLIFILSLLTVWSTSFASATNLPDDEVKAMKDMAKVLGKKDWDFKVDPCSGENGWVKPNPVQGDENNVTCVCSSSVSDNNATVCHVTNVVLKGQNLQGTLPRELVRLPYLQEIDLSRNYLNGTIPKEWGSLNHLVNISLIGNRLTGPIPAELGNLTSLRSMVLEFNQLSGHLPPELGNLSQIQRLFLTSNNFSGELPATFARLTRLIDFRIGGNQFSGKIPSFIGSWTSLVKLVIQGSGLRGPIPSEISFLHNMTDLRISDLNGPDSSFPQLARMTGLKSLVLRSCNITGTLPEYLGTMTSIKSLDLSFNELTGQIPSTYTGLRKAEYIYLTGNLLSGPVPEWVERSGFVDLSYNNFSIGNPGQPTCERGNVNLFSSALTGNNSGTVPCLIGFRCPKTWYSLHINCGGQKLTVNGSTIFEEDSDGSGSATFYRSDTNWILSSTGYFFDKERTDYYTVQSASSLSITNAKLYMAARVSPLSLSYFAFCMGNGNYTVKLHFAEIMFTDDQTYSSLGRRVFDAYIQGKLVLKDFNIAEEAGGVGKAVIKEFTGIVTRNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVEPDFKSPLENGSSISGGTVVGIVVSGAIIVILVFGTLWWRGNLGPKNSLARELKNLNLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSKQGNREFINEIGMISAMQHPCLVKLHGCCVEIDQLLLVYEYMENNSLARALFGQEGRLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHVSTRIVGTYGYMPPEYAMHGHLSDKVDVYSFGIVALEVVSGRSNNMDNSLYLLEWAHFLKENNNLMEIVDPRLKLKFIKAEAMVMINVAFLCTNVSASLRPSMSSVVSMLEDRTVRKVVPDASEASDGMKRMQKYYQNIGKNSISTMEEVSSIDSPTSVSDLYPVHLDSSYWMQRN 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0735 997 Gene3D Ribonuclease Inhibitor 270 388 IPR032675 -
Lele12g0735 997 Gene3D Ribonuclease Inhibitor 195 269 IPR032675 -
Lele12g0735 997 ProSiteProfiles Protein kinase domain profile. 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0735 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 740 - -
Lele12g0735 997 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 27 267 - -
Lele12g0735 997 Pfam Protein kinase domain 666 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0735 997 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Lele12g0735 997 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0735 997 Pfam Malectin domain 405 588 IPR021720 -
Lele12g0735 997 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Lele12g0735 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 952 - -
Lele12g0735 997 Gene3D - 403 592 - -
Lele12g0735 997 CDD STKc_IRAK 671 932 - -
Lele12g0735 997 Gene3D Ribonuclease Inhibitor 47 194 IPR032675 -
Lele12g0735 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Lele12g0735 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 941 - -
Lele12g0735 997 Gene3D Transferase(Phosphotransferase) domain 1 741 953 - -
Lele12g0735 997 SUPERFAMILY L domain-like 71 346 - -
Lele12g0735 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 593 - -
Lele12g0735 997 SUPERFAMILY Protein kinase-like (PK-like) 648 937 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0735 Lele-ChrLele12 15491644 15500377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0735 20 979 Receptor kinase-like Gene Family AT1G53420 55.975 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0735 Pkinase 1e-45 CL0016